You need a JavaScript-enabled browser.

Please return to the top page after you change the setting of JavaScript.

AS locus structure map

05-0000639:
Chromosome: 5 Position: 65299392..65313080 (13.7Kbp) Strand: - Number of RASVs: 12
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
05-0000639 HIX0000101

RASV
ID Cell type Tissue type Development stage Sex Definition
ENSCAFT00000031335
XM_536735 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 1 (LOC479597), mRNA.
XM_854119 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 3 (LOC479597), mRNA.
XM_854162 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 4 (LOC479597), mRNA.
XM_854200 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 5 (LOC479597), mRNA.
XM_854238 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 6 (LOC479597), mRNA.
XM_854270 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 7 (LOC479597), mRNA.
XM_854307 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 8 (LOC479597), mRNA.
XM_854346 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 9 (LOC479597), mRNA.
XM_854380 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 10 (LOC479597), mRNA.
XM_854480 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 13 (LOC479597), mRNA.
XM_854516 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 14 (LOC479597), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
XM_854038 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 2 (LOC479597), mRNA.
XM_854416 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 11 (LOC479597), mRNA.
XM_854450 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 12 (LOC479597), mRNA.
XM_536735 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 1 (LOC479597), mRNA.
XM_854119 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 3 (LOC479597), mRNA.
XM_854162 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 4 (LOC479597), mRNA.
XM_854200 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 5 (LOC479597), mRNA.
XM_854238 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 6 (LOC479597), mRNA.
XM_854270 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 7 (LOC479597), mRNA.
XM_854307 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 8 (LOC479597), mRNA.
XM_854346 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 9 (LOC479597), mRNA.
XM_854380 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 10 (LOC479597), mRNA.
XM_854480 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 13 (LOC479597), mRNA.
XM_854516 PREDICTED: Canis familiaris similar to T21B10.2b, transcript variant 14 (LOC479597), mRNA.

Ensembl
ID Definition
ENSCAFT00000031335
 
Annotation controller