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AS locus structure map

07-0000187: PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 5 (LOC480052), mRNA.
Chromosome: 7 Position: 23666252..23693729 (27.5Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
07-0000187 HIX0001374

RASV
ID Cell type Tissue type Development stage Sex Definition
XM_855506 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 2 (LOC480052), mRNA.
XM_855537 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 3 (LOC480052), mRNA.
XM_855569 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 4 (LOC480052), mRNA.
XM_855602 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 5 (LOC480052), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
ENSCAFT00000022081
XM_537174 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 1 (LOC480052), mRNA.

RefSeq
ID Definition
XM_855506 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 2 (LOC480052), mRNA.
XM_537174 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 1 (LOC480052), mRNA.
XM_855537 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 3 (LOC480052), mRNA.
XM_855569 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 4 (LOC480052), mRNA.
XM_855602 PREDICTED: Canis familiaris similar to v-abl Abelson murine leukemia viral oncogene homolog 2 isoform a, transcript variant 5 (LOC480052), mRNA.

Ensembl
ID Definition
ENSCAFT00000022081
 
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