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AS locus structure map

07-0000291: PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 3 (LOC490385), mRNA.
Chromosome: 7 Position: 41477998..41513415 (35.4Kbp) Strand: + Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
07-0000291 HIX0023551

RASV
ID Cell type Tissue type Development stage Sex Definition
XM_858728 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 4 (LOC490385), mRNA.
XM_547506 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 1 (LOC490385), mRNA.
ENSCAFT00000025552
XM_858683 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 2 (LOC490385), mRNA.
XM_858704 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 3 (LOC490385), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
ENSCAFT00000025541

RefSeq
ID Definition
XM_858728 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 4 (LOC490385), mRNA.
XM_547506 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 1 (LOC490385), mRNA.
XM_858683 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 2 (LOC490385), mRNA.
XM_858704 PREDICTED: Canis familiaris similar to Poly [ADP-ribose] polymerase-1 (PARP-1) (ADPRT) (NAD(+) ADP-ribosyltransferase-1) (Poly[ADP-ribose] synthetase-1), transcript variant 3 (LOC490385), mRNA.

Ensembl
ID Definition
ENSCAFT00000025541
ENSCAFT00000025552
 
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