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AS locus structure map

10-0000068: PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 2 (LOC607458), mRNA.
Chromosome: 10 Position: 4340472..4345604 (5.1Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
10-0000068 HIX0201820
10-0000068 HIX0023234

RASV
ID Cell type Tissue type Development stage Sex Definition
XM_844151 PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 2 (LOC607458), mRNA.
XM_853127 PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 3 (LOC607458), mRNA.
XM_853209 PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 4 (LOC607458), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
ENSCAFT00000000313

RefSeq
ID Definition
XM_844151 PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 2 (LOC607458), mRNA.
XM_853127 PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 3 (LOC607458), mRNA.
XM_853209 PREDICTED: Canis familiaris similar to serine hydroxymethyltransferase 2 (mitochondrial), transcript variant 4 (LOC607458), mRNA.

Ensembl
ID Definition
ENSCAFT00000000313
 
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