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AS locus structure map

17-0000218: PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 12 (LOC475742), mRNA.
Chromosome: 17 Position: 37581665..37614273 (32.6Kbp) Strand: + Number of RASVs: 12
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
17-0000218 HIX0002273

RASV
ID Cell type Tissue type Development stage Sex Definition
ENSCAFT00000010875
XM_532949 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 1 (LOC475742), mRNA.
XM_859023 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 3 (LOC475742), mRNA.
XM_859042 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 4 (LOC475742), mRNA.
XM_859064 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 5 (LOC475742), mRNA.
XM_859083 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 6 (LOC475742), mRNA.
XM_859107 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 7 (LOC475742), mRNA.
XM_859135 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 8 (LOC475742), mRNA.
XM_859159 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 9 (LOC475742), mRNA.
XM_859183 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 10 (LOC475742), mRNA.
XM_859204 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 11 (LOC475742), mRNA.
XM_859223 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 12 (LOC475742), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
XM_859001 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 2 (LOC475742), mRNA.
XM_532949 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 1 (LOC475742), mRNA.
XM_859023 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 3 (LOC475742), mRNA.
XM_859042 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 4 (LOC475742), mRNA.
XM_859064 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 5 (LOC475742), mRNA.
XM_859083 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 6 (LOC475742), mRNA.
XM_859107 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 7 (LOC475742), mRNA.
XM_859135 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 8 (LOC475742), mRNA.
XM_859159 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 9 (LOC475742), mRNA.
XM_859183 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 10 (LOC475742), mRNA.
XM_859204 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 11 (LOC475742), mRNA.
XM_859223 PREDICTED: Canis familiaris similar to activating signal cointegrator 1 complex subunit 3-like 1, transcript variant 12 (LOC475742), mRNA.

Ensembl
ID Definition
ENSCAFT00000010875
 
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