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AS locus structure map

X-0000121: PREDICTED: Canis familiaris similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I), transcript variant 1 (LOC480858), mRNA.
Chromosome: X Position: 15291778..15307515 (15.7Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
ID Corresponding human locus
X-0000121 HIX0016687
X-0000121 HIX0028382

RASV
ID Cell type Tissue type Development stage Sex Definition
XM_537975 PREDICTED: Canis familiaris similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I), transcript variant 1 (LOC480858), mRNA.
XM_853433 PREDICTED: Canis familiaris similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I), transcript variant 3 (LOC480858), mRNA.
XM_853468 PREDICTED: Canis familiaris similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I), transcript variant 4 (LOC480858), mRNA.

Other ASV
ID Cell type Tissue type Development stage Sex Definition
ENSCAFT00000020698

RefSeq
ID Definition
XM_537975 PREDICTED: Canis familiaris similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I), transcript variant 1 (LOC480858), mRNA.
XM_853433 PREDICTED: Canis familiaris similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I), transcript variant 3 (LOC480858), mRNA.
XM_853468 PREDICTED: Canis familiaris similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I), transcript variant 4 (LOC480858), mRNA.

Ensembl
ID Definition
ENSCAFT00000020698
 
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