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AS locus structure map

HIX0010385: Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
Chromosome: 12 Position: 6976283..6980267 (4.0Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000033038 TPI1 190450 Skeletal Muscle Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000264087 TPI1 190450 Pooled, 40 cell lines Similar to Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000493433 TPI1 190450 teratocarcinoma Similar to Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000495285 TPI1 190450 skeletal muscle Triosephosphate isomerase family protein.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000033462 TPI1 190450 Skin, melanotic melanoma, high MDR. Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000034284 TPI1 190450 Brain, neuroblastoma Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000035328 TPI1 190450 Placenta, choriocarcinoma Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000037004 TPI1 190450 Kidney, hypernephroma Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000048759 TPI1 190450 adrenal gland Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000432148 TPI1 190450 skeletal muscle Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase).
HIT000038196 TPI1 190450 Prostate Triosephosphate isomerase family protein.

RefSeq
ID Definition
NM_000365 Homo sapiens triosephosphate isomerase 1 (TPI1), transcript variant 1, mRNA.
NM_001159287 Homo sapiens triosephosphate isomerase 1 (TPI1), transcript variant 2, mRNA.
NR_027483 Homo sapiens triosephosphate isomerase 1 (TPI1), transcript variant 3, transcribed RNA.

Ensembl
ID Definition
ENST00000229270 Triosephosphate isomerase (TIM)(EC 5.3.1.1)(Triose- phosphate isomerase) [Source:UniProtKB/Swiss- Prot;Acc:P60174]
ENST00000396705 Triosephosphate isomerase (TIM)(EC 5.3.1.1)(Triose- phosphate isomerase) [Source:UniProtKB/Swiss- Prot;Acc:P60174]
ENST00000382270 Triosephosphate isomerase (TIM)(EC 5.3.1.1)(Triose- phosphate isomerase) [Source:UniProtKB/Swiss- Prot;Acc:P60174]
 
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