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AS locus structure map

HIX0000012: Agrin precursor.
Chromosome: 1 Position: 955503..991496 (36.0Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0000012 04-0000232 (mouse_mrna)
HIX0000012 05-0000107 (rat_rna)
HIX0000012 01-0002005 (macaque_rna)
HIX0000012 05-0000577 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000242560 AGRN 254300 retinal pigment epithelium Agrin precursor.
HIT000048634 AGRN 254300 brain Similar to Agrin precursor.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000062409 AGRN 254300 Similar to Agrin precursor.
HIT000221865 AGRN 254300 Similar to Agrin precursor.

RefSeq
ID Definition
NM_198576 Homo sapiens agrin (AGRN), mRNA.

Ensembl
ID Definition
ENST00000379370 Agrin Precursor [Source:UniProtKB/Swiss- Prot;Acc:O00468]
ENST00000379364 Agrin Precursor [Source:UniProtKB/Swiss- Prot;Acc:O00468]
ENST00000418300
ENST00000419249 Agrin Precursor [Source:UniProtKB/Swiss- Prot;Acc:O00468]
 
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