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AS locus structure map

HIX0000560: SCL-interrupting locus protein (TAL-1-interrupting locus protein).
Chromosome: 1 Position: 47681963..47779819 (97.9Kbp) Strand: - Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0000560 04-0000774 (mouse_mrna)
HIX0000560 04-0001304 (mouse_mrna)
HIX0000560 05-0000938 (rat_rna)
HIX0000560 01-0000522 (chimpanzee_rna)
HIX0000560 01-0000523 (chimpanzee_rna)
HIX0000560 01-0001616 (macaque_rna) low priority
HIX0000560 01-0001744 (macaque_rna)
HIX0000560 15-0000143 (dog_rna)
HIX0000560 15-0000144 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000195973 TAL1 187040 T-cell acute lymphocytic leukemia protein 1 (TAL-1) (Stem cell protein) (T-cell leukemia/lymphoma protein 5).
HIT000196331 STIL 612703 Bone marrow SCL-interrupting locus protein (TAL-1-interrupting locus protein).
HIT000215723 TAL1 187040 TAL-1.
HIT000306777 STIL 612703 uterus endothel, primary cell culture adult SCL/TAL1 interrupting locus isoform 1.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
NM_003035 Homo sapiens SCL/TAL1 interrupting locus (STIL), transcript variant 2, mRNA.
NM_003189 Homo sapiens T-cell acute lymphocytic leukemia 1 (TAL1), mRNA.
NM_001048166 Homo sapiens SCL/TAL1 interrupting locus (STIL), transcript variant 1, mRNA.

Ensembl
ID Definition
ENST00000294339 T-cell acute lymphocytic leukemia protein 1 (TAL- 1)(Stem cell protein)(T-cell leukemia/lymphoma protein 5) [Source:UniProtKB/Swiss-Prot;Acc:P17542]
ENST00000337817 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000360380 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000371877 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000371884 T-cell acute lymphocytic leukemia protein 1 (TAL- 1)(Stem cell protein)(T-cell leukemia/lymphoma protein 5) [Source:UniProtKB/Swiss-Prot;Acc:P17542]
ENST00000243182 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000371874 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000371883 T-cell acute lymphocytic leukemia protein 1 (TAL- 1)(Stem cell protein)(T-cell leukemia/lymphoma protein 5) [Source:UniProtKB/Swiss-Prot;Acc:P17542]
ENST00000396221 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000413565 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000418131 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000427907 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000433827 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000447475 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
ENST00000436811 SCL-interrupting locus protein (TAL-1-interrupting locus protein) [Source:UniProtKB/Swiss-Prot;Acc:Q15468]
 
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