You need a JavaScript-enabled browser.

Please return to the top page after you change the setting of JavaScript.

AS locus structure map

HIX0001060: Pogo transposable element with ZNF domain isoform 3.
Chromosome: 1 Position: 151375200..151431941 (56.7Kbp) Strand: - Number of RASVs: 8
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0001060 03-0000730 (mouse_mrna)
HIX0001060 01-0000930 (chimpanzee_rna)
HIX0001060 01-0000347 (macaque_rna)
HIX0001060 17-0000463 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000259711 POGZ Placenta, normal Pogo transposable element with ZNF domain isoform 3.
HIT000059210 POGZ neuroblastoma Similar to Pogo transposable element with ZNF domain isoform 2.
HIT000054346 POGZ human endometrium carcinoma cell line adult Similar to Pogo transposable element with ZNF domain isoform 2.
HIT000054622 POGZ human retina adult Pogo transposable element with ZNF domain.
HIT000057810 POGZ human cervix adult Similar to Pogo transposable element with ZNF domain isoform 2.
HIT000494415 POGZ brain fetal Similar to Pogo transposable element with ZNF domain isoform 2.
HIT000494931 POGZ placenta Pogo transposable element with ZNF domain.
HIT000497125 POGZ testis Pogo transposable element with ZNF domain isoform 2.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000280364 POGZ Placenta Pogo transposable element with ZNF domain isoform 3.
HIT000284758 POGZ Fetal brain Pogo transposable element with ZNF domain isoform 3.
HIT000002674 POGZ colon mucosa Pogo transposable element with ZNF domain isoform 3.
HIT000328539 POGZ Similar to Pogo transposable element with ZNF domain isoform 2.

RefSeq
ID Definition
NM_015100 Homo sapiens pogo transposable element with ZNF domain (POGZ), transcript variant 1, mRNA.
NM_145796 Homo sapiens pogo transposable element with ZNF domain (POGZ), transcript variant 3, mRNA.
NM_207171 Homo sapiens pogo transposable element with ZNF domain (POGZ), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000271715 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000361398 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000392723 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000437847 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000358476 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000368863 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000409503 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000450842 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000439756 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
ENST00000441516 Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3]
 
Annotation controller