HIX0001060: Pogo transposable element with ZNF domain isoform 3.
Chromosome: 1
Position: 151375200..151431941 (56.7Kbp)
Strand: -
Number of RASVs: 8
ORF:
Full-length
Truncated
NMD
UTR
Splice-site:
GT-AG
GC-AG
AT-AC
Other
NAGNAG
AS:
AS exon
AS junction
Polymorphism:
SNP
Locus and transcript information
AS locus
RASV
Hyperlink management |
HUGO |
OMIM |
Cell type |
Tissue type |
Development stage |
Sex |
Definition |
HIT000259711 |
POGZ |
|
|
Placenta, normal |
|
|
Pogo transposable element with ZNF domain isoform 3. |
HIT000059210 |
POGZ |
|
neuroblastoma |
|
|
|
Similar to Pogo transposable element with ZNF domain isoform 2. |
HIT000054346 |
POGZ |
|
|
human endometrium carcinoma cell line |
adult |
|
Similar to Pogo transposable element with ZNF domain isoform 2. |
HIT000054622 |
POGZ |
|
|
human retina |
adult |
|
Pogo transposable element with ZNF domain. |
HIT000057810 |
POGZ |
|
|
human cervix |
adult |
|
Similar to Pogo transposable element with ZNF domain isoform 2. |
HIT000494415 |
POGZ |
|
|
brain |
fetal |
|
Similar to Pogo transposable element with ZNF domain isoform 2. |
HIT000494931 |
POGZ |
|
|
placenta |
|
|
Pogo transposable element with ZNF domain. |
HIT000497125 |
POGZ |
|
|
testis |
|
|
Pogo transposable element with ZNF domain isoform 2. |
Other ASV
Hyperlink management |
HUGO |
OMIM |
Cell type |
Tissue type |
Development stage |
Sex |
Definition |
HIT000280364 |
POGZ |
|
|
Placenta |
|
|
Pogo transposable element with ZNF domain isoform 3. |
HIT000284758 |
POGZ |
|
|
Fetal brain |
|
|
Pogo transposable element with ZNF domain isoform 3. |
HIT000002674 |
POGZ |
|
|
colon mucosa |
|
|
Pogo transposable element with ZNF domain isoform 3. |
HIT000328539 |
POGZ |
|
|
|
|
|
Similar to Pogo transposable element with ZNF domain isoform 2. |
RefSeq
ID |
Definition |
NM_015100 |
Homo sapiens pogo transposable element with ZNF domain (POGZ), transcript variant 1, mRNA. |
NM_145796 |
Homo sapiens pogo transposable element with ZNF domain (POGZ), transcript variant 3, mRNA. |
NM_207171 |
Homo sapiens pogo transposable element with ZNF domain (POGZ), transcript variant 2, mRNA. |
Ensembl
ID |
Definition |
ENST00000271715 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000361398 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000392723 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000437847 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000358476 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000368863 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000409503 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000450842 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000439756 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |
ENST00000441516 |
Pogo transposable element with ZNF domain [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3K3] |