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AS locus structure map

HIX0001083: Protein S100-A2 (S100 calcium-binding protein A2) (Protein S-100L) (CAN19).
Chromosome: 1 Position: 153533586..153540366 (6.8Kbp) Strand: - Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0001083 01-0000974 (chimpanzee_rna)
HIX0001083 01-0001241 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000031221 S100A2 176993 Ovary, adenocarcinoma Protein S100-A2 (S100 calcium-binding protein A2) (Protein S-100L) (CAN19).
HIT000338268 S100A2 176993 Pooled, 40 cell lines Protein S100-A2 (S100 calcium-binding protein A2) (Protein S-100L) (CAN19).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000196657 S100A2 176993 epithelial mammary adult female Protein S100-A2 (S100 calcium-binding protein A2) (Protein S-100L) (CAN19).

RefSeq
ID Definition
NM_005978 Homo sapiens S100 calcium binding protein A2 (S100A2), mRNA.

Ensembl
ID Definition
ENST00000368708 Protein S100-A2 (S100 calcium-binding protein A2)(Protein S-100L)(CAN19) [Source:UniProtKB/Swiss- Prot;Acc:P29034]
ENST00000368709 Protein S100-A2 (S100 calcium-binding protein A2)(Protein S-100L)(CAN19) [Source:UniProtKB/Swiss- Prot;Acc:P29034]
ENST00000368710 Protein S100-A2 (S100 calcium-binding protein A2)(Protein S-100L)(CAN19) [Source:UniProtKB/Swiss- Prot;Acc:P29034]
ENST00000368711 Protein S100-A2 (S100 calcium-binding protein A2)(Protein S-100L)(CAN19) [Source:UniProtKB/Swiss- Prot;Acc:P29034]
ENST00000368707 Protein S100-A2 (S100 calcium-binding protein A2)(Protein S-100L)(CAN19) [Source:UniProtKB/Swiss- Prot;Acc:P29034]
 
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