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AS locus structure map

HIX0001626: Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
Chromosome: 1 Position: 224363458..224389659 (26.2Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0001626 01-0000334 (mouse_mrna)
HIX0001626 01-0001478 (chimpanzee_rna)
HIX0001626 01-0000762 (macaque_rna)
HIX0001626 07-0000310 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000080335 DEGS1 lung fetal; 14 wk post-conception male Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000061687 DEGS1 Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000281581 Fetal brain Similar to Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000302498 Placenta Cot 25-normalized Similar to Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000030029 DEGS1 Placenta, choriocarcinoma Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000254521 DEGS1 Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000278520 DEGS1 Placenta Cot 25-normalized Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000291892 DEGS1 Placenta Cot 25-normalized Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000291911 DEGS1 T cells (Jurkat cell line) Cot 10-normalized Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000293284 DEGS1 Placenta Cot 25-normalized Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).
HIT000298419 DEGS1 Fetal brain Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.-) (Degenerative spermatocyte homolog 1) (Membrane lipid desaturase) (Migration- inducing gene 15 protein).

RefSeq
ID Definition
NM_003676 Homo sapiens degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) (DEGS1), transcript variant 1, mRNA.
NM_144780 Homo sapiens degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) (DEGS1), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000323699 Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.- )(Degenerative spermatocyte homolog 1)(Membrane lipid desaturase)(Migration-inducing gene 15 protein) [Source:UniProtKB/Swiss-Prot;Acc:O15121]
ENST00000391877 Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.- )(Degenerative spermatocyte homolog 1)(Membrane lipid desaturase)(Migration-inducing gene 15 protein) [Source:UniProtKB/Swiss-Prot;Acc:O15121]
ENST00000415210 Sphingolipid delta(4)-desaturase DES1 (EC 1.14.-.- )(Degenerative spermatocyte homolog 1)(Membrane lipid desaturase)(Migration-inducing gene 15 protein) [Source:UniProtKB/Swiss-Prot;Acc:O15121]
 
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