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AS locus structure map

HIX0001629: WD repeat-containing protein 26 (CUL4- and DDB1-associated WDR protein 2) (Myocardial ischemic preconditioning up-regulated protein 2).
Chromosome: 1 Position: 224572845..224624735 (51.9Kbp) Strand: - Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0001629 01-0001128 (mouse_mrna)
HIX0001629 13-0000391 (rat_rna)
HIX0001629 01-0001481 (chimpanzee_rna)
HIX0001629 01-0001297 (macaque_rna)
HIX0001629 07-0000306 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000099507 WDR26 Lung, large cell carcinoma WD repeat domain 26 isoform a.
HIT000251085 WDR26 WD repeat domain 26 isoform b.
HIT000070645 liver fetus Similar to RecName: Full=WD repeat-containing protein 26; AltName: Full=CUL4- and DDB1-associated WDR protein 2; AltName: Full=Myocardial ischemic preconditioning up-regulated protein 2;
HIT000093459 WDR26 Testis Similar to WD repeat domain 26 isoform b.
HIT000426775 WDR26 thalamus Similar to WD repeat domain 26 isoform b.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000251558 WDR26 WD repeat domain 26 isoform a.
HIT000329822 WDR26 aorta endothelial cell WD repeat-containing protein 26 (CUL4- and DDB1-associated WDR protein 2) (Myocardial ischemic preconditioning up-regulated protein 2).
HIT000394707 WDR26 WD repeat domain 26 isoform a.
HIT000261195 WDR26 Uterus, leiomyosarcoma Similar to WD repeat domain 26 isoform b.

RefSeq
ID Definition
NM_025160 Homo sapiens WD repeat domain 26 (WDR26), transcript variant 1, mRNA.
NM_001115113 Homo sapiens WD repeat domain 26 (WDR26), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000295024 WD repeat-containing protein 26 (CUL4- and DDB1- associated WDR protein 2)(Myocardial ischemic preconditioning up-regulated protein 2) [Source:UniProtKB/Swiss-Prot;Acc:Q9H7D7]
ENST00000414423 WD repeat-containing protein 26 (CUL4- and DDB1- associated WDR protein 2)(Myocardial ischemic preconditioning up-regulated protein 2) [Source:UniProtKB/Swiss-Prot;Acc:Q9H7D7]
ENST00000366852 WD repeat-containing protein 26 (CUL4- and DDB1- associated WDR protein 2)(Myocardial ischemic preconditioning up-regulated protein 2) [Source:UniProtKB/Swiss-Prot;Acc:Q9H7D7]
ENST00000443112 WD repeat-containing protein 26 (CUL4- and DDB1- associated WDR protein 2)(Myocardial ischemic preconditioning up-regulated protein 2) [Source:UniProtKB/Swiss-Prot;Acc:Q9H7D7]
ENST00000445239 WD repeat-containing protein 26 (CUL4- and DDB1- associated WDR protein 2)(Myocardial ischemic preconditioning up-regulated protein 2) [Source:UniProtKB/Swiss-Prot;Acc:Q9H7D7]
 
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