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AS locus structure map

HIX0001641: Conserved hypothetical protein.
Chromosome: 1 Position: 226170403..226187094 (16.7Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0001641 13-0000218 (rat_rna)
HIX0001641 01-0001494 (chimpanzee_rna)
HIX0001641 01-0001575 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000056966 C1orf55 human uterus adult Conserved hypothetical protein.
HIT000047653 C1orf55 brain fetal Conserved hypothetical protein.
HIT000264392 C1orf55 Brain, hippocampus Conserved hypothetical protein.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000088938 C1orf55 Uterus, leiomyosarcoma Conserved hypothetical protein.

RefSeq
ID Definition
NM_152608 Homo sapiens chromosome 1 open reading frame 55 (C1orf55), mRNA.

Ensembl
ID Definition
ENST00000272091 UPF0667 protein C1orf55 [Source:UniProtKB/Swiss- Prot;Acc:Q6IQ49]
ENST00000366817 UPF0667 protein C1orf55 [Source:UniProtKB/Swiss- Prot;Acc:Q6IQ49]
ENST00000366818 UPF0667 protein C1orf55 [Source:UniProtKB/Swiss- Prot;Acc:Q6IQ49]
 
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