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AS locus structure map

HIX0001650: Similar to Myotonic dystrophy kinase-related CDC42-binding protein kinase alpha (Fragment).
Chromosome: 1 Position: 227177561..227506175 (328.6Kbp) Strand: - Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0001650 01-0000343 (mouse_mrna)
HIX0001650 01-0001502 (chimpanzee_rna)
HIX0001650 01-0000481 (macaque_rna)
HIX0001650 07-0000288 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000084875 CDC42BPA 603412 CDC42-binding protein kinase alpha isoform A.
HIT000023221 brain Similar to Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1) (CDC42- binding protein kinase alpha) (Myotonic dystrophy kinase-related CDC42-binding kinase alpha) (Myotonic dystrophy protein kinase-like alpha) (MRCK alpha) (DMPK-like alpha).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000056866 CDC42BPA 603412 human cervix adult Similar to CDC42-binding protein kinase alpha isoform A.
HIT000248403 CDC42BPA 603412 colon adult male Similar to Myotonic dystrophy kinase-related CDC42-binding protein kinase alpha (Fragment).
HIT000248404 CDC42BPA 603412 colon adult male CDC42-binding protein kinase alpha isoform A.
HIT000328903 CDC42BPA 603412 brain Similar to Myotonic dystrophy kinase-related CDC42-binding protein kinase alpha (Fragment).
HIT000500360 CDC42BPA 603412 Testicle, PCR rescued clones Similar to Myotonic dystrophy kinase-related CDC42-binding protein kinase alpha (Fragment).

RefSeq
ID Definition
NM_014826 Homo sapiens CDC42 binding protein kinase alpha (DMPK-like) (CDC42BPA), transcript variant A, mRNA.
NM_003607 Homo sapiens CDC42 binding protein kinase alpha (DMPK-like) (CDC42BPA), transcript variant B, mRNA.

Ensembl
ID Definition
ENST00000366765 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000366767 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000366769 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000334218 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000366762 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000366764 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000366766 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000429440 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000441725 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000442054 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
ENST00000448940 Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)(Myotonic dystrophy kinase-related CDC42-binding kinase alpha)(Myotonic dystrophy protein kinase-like alpha)(MRCK alpha)(CDC42-binding protein kinase alpha)(DMPK-like alpha) [Source:UniProtKB/Swiss- Prot;Acc:Q5VT25]
 
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