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AS locus structure map

HIX0002144: Similar to Ankyrin repeat domain 53 isoform b.
Chromosome: 2 Position: 71205575..71212629 (7.1Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0002144 06-0000676 (mouse_mrna)
HIX0002144 02a-0000321 (chimpanzee_rna)
HIX0002144 13-0000066 (macaque_rna)
HIX0002144 10-0000543 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000018346 ANKRD53 testis Similar to Ankyrin repeat domain 53 isoform b.
HIT000051353 ANKRD53 Brain, adult medulla Ankyrin repeat domain 53 isoform b.
HIT000283580 ANKRD53 Fetal brain Similar to Ankyrin repeat domain 53 isoform a.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
NM_024933 Homo sapiens ankyrin repeat domain 53 (ANKRD53), transcript variant 2, mRNA.
NM_001115116 Homo sapiens ankyrin repeat domain 53 (ANKRD53), transcript variant 1, mRNA.

Ensembl
ID Definition
ENST00000272421 Ankyrin repeat domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q8N9V6]
ENST00000360589 Ankyrin repeat domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q8N9V6]
ENST00000441349 Ankyrin repeat domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q8N9V6]
ENST00000457410 Ankyrin repeat domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q8N9V6]
 
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