You need a JavaScript-enabled browser.

Please return to the top page after you change the setting of JavaScript.

AS locus structure map

HIX0002273: U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog).
Chromosome: 2 Position: 96940074..96971284 (31.2Kbp) Strand: - Number of RASVs: 6
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0002273 02-0001287 (mouse_mrna)
HIX0002273 03-0000533 (rat_rna)
HIX0002273 02a-0000446 (chimpanzee_rna)
HIX0002273 13-0000662 (macaque_rna)
HIX0002273 17-0000218 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000009936 SNRNP200 610359 human lung Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog).
HIT000015538 SNRNP200 610359 cerebellum Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog).
HIT000066663 SNRNP200 610359 Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog).
HIT000255549 SNRNP200 610359 U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog).
HIT000390685 SNRNP200 610359 PCR rescued clones Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog).
HIT000498089 SNRNP200 610359 thymus Similar to U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
NM_014014 Homo sapiens small nuclear ribonucleoprotein 200kDa (U5) (SNRNP200), mRNA.

Ensembl
ID Definition
ENST00000323853 U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-)(U5 snRNP-specific 200 kDa protein)(U5- 200KD)(Activating signal cointegrator 1 complex subunit 3- like 1)(BRR2 homolog) [Source:UniProtKB/Swiss- Prot;Acc:O75643]
ENST00000349783 U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-)(U5 snRNP-specific 200 kDa protein)(U5- 200KD)(Activating signal cointegrator 1 complex subunit 3- like 1)(BRR2 homolog) [Source:UniProtKB/Swiss- Prot;Acc:O75643]
ENST00000429650 U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-)(U5 snRNP-specific 200 kDa protein)(U5- 200KD)(Activating signal cointegrator 1 complex subunit 3- like 1)(BRR2 homolog) [Source:UniProtKB/Swiss- Prot;Acc:O75643]
 
Annotation controller