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AS locus structure map

HIX0002308: Eukaryotic translation initiation factor 5B.
Chromosome: 2 Position: 99953834..100016728 (62.9Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0002308 09-0000279 (rat_rna)
HIX0002308 02a-0000476 (chimpanzee_rna)
HIX0002308 10-0000400 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000041647 EIF5B 606086 Lymph, lymphoma Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2).
HIT000016731 lung Similar to Eif5b protein (Fragment).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000000466 EIF5B 606086 brain adult male Eukaryotic translation initiation factor 5B.
HIT000066255 EIF5B 606086 testis Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2).
HIT000244122 EIF5B 606086 Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2).
HIT000296353 EIF5B 606086 B cells (Ramos cell line) Cot 25-normalized Similar to Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2).
HIT000427041 EIF5B 606086 placenta Similar to Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2).

RefSeq
ID Definition
NM_015904 Homo sapiens eukaryotic translation initiation factor 5B (EIF5B), mRNA.

Ensembl
ID Definition
ENST00000289371 Eukaryotic translation initiation factor 5B (eIF- 5B)(Translation initiation factor IF-2) [Source:UniProtKB/Swiss-Prot;Acc:O60841]
 
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