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AS locus structure map

HIX0002599: Rap guanine nucleotide exchange factor 4 (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII) (Exchange factor directly activated by cAMP 2) (Epac 2).
Chromosome: 2 Position: 173600525..173917725 (317.2Kbp) Strand: + Number of RASVs: 10
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0002599 02-0000033 (mouse_mrna)
HIX0002599 03-0001250 (rat_rna)
HIX0002599 12-0000136 (macaque_rna)
HIX0002599 36-0000089 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000039718 RAPGEF4 606058 Testis Rap guanine nucleotide exchange factor 4 (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII) (Exchange factor directly activated by cAMP 2) (Epac 2).
HIT000052340 RAPGEF4 606058 Brain, hypothalamus Rap guanine nucleotide exchange factor (GEF) 4 isoform b.
HIT000499627 RAPGEF4 606058 brain Similar to Rap guanine nucleotide exchange factor (GEF) 4 isoform b.
HIT000329616 RAPGEF4 606058 brain Similar to Rap guanine nucleotide exchange factor 4 (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII) (Exchange factor directly activated by cAMP 2) (Epac 2).
HIT000429239 RAPGEF4 606058 testis Similar to Rap guanine nucleotide exchange factor 4 (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII) (Exchange factor directly activated by cAMP 2) (Epac 2).
HIT000489057 RAPGEF4 606058 amygdala Similar to Rap guanine nucleotide exchange factor (GEF) 4 isoform b.
HIT000489069 RAPGEF4 606058 amygdala Similar to Rap guanine nucleotide exchange factor (GEF) 4 isoform b.
HIT000489538 RAPGEF4 606058 brain Similar to Rap guanine nucleotide exchange factor (GEF) 4 isoform b.
HIT000490964 RAPGEF4 606058 thalamus Similar to Rap guanine nucleotide exchange factor (GEF) 4 isoform b.
HIT000497356 RAPGEF4 606058 testis Similar to Rap guanine nucleotide exchange factor (GEF) 4 isoform b.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000058910 RAPGEF4 606058 Rap guanine nucleotide exchange factor 4 (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII) (Exchange factor directly activated by cAMP 2) (Epac 2).
HIT000431950 RAPGEF4 606058 hippocampus Rap guanine nucleotide exchange factor 4 (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII) (Exchange factor directly activated by cAMP 2) (Epac 2).
HIT000221424 RAPGEF4 606058 Rap guanine nucleotide exchange factor 4 (cAMP-regulated guanine nucleotide exchange factor II) (cAMP-GEFII) (Exchange factor directly activated by cAMP 2) (Epac 2).
HIT000498902 RAPGEF4 606058 trachea Rap guanine nucleotide exchange factor (GEF) 4 isoform b.
HIT000499685 RAPGEF4 606058 hippocampus Similar to Rap guanine nucleotide exchange factor (GEF) 4 isoform b.

RefSeq
ID Definition
NM_007023 Homo sapiens Rap guanine nucleotide exchange factor (GEF) 4 (RAPGEF4), transcript variant 1, mRNA.
NM_001100397 Homo sapiens Rap guanine nucleotide exchange factor (GEF) 4 (RAPGEF4), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000397081 Rap guanine nucleotide exchange factor 4 (cAMP- regulated guanine nucleotide exchange factor II)(cAMP- GEFII)(Exchange factor directly activated by cAMP 2)(Epac 2) [Source:UniProtKB/Swiss-Prot;Acc:Q8WZA2]
ENST00000264111 Rap guanine nucleotide exchange factor 4 (cAMP- regulated guanine nucleotide exchange factor II)(cAMP- GEFII)(Exchange factor directly activated by cAMP 2)(Epac 2) [Source:UniProtKB/Swiss-Prot;Acc:Q8WZA2]
ENST00000397085 Rap guanine nucleotide exchange factor 4 (cAMP- regulated guanine nucleotide exchange factor II)(cAMP- GEFII)(Exchange factor directly activated by cAMP 2)(Epac 2) [Source:UniProtKB/Swiss-Prot;Acc:Q8WZA2]
ENST00000397087 Rap guanine nucleotide exchange factor 4 (cAMP- regulated guanine nucleotide exchange factor II)(cAMP- GEFII)(Exchange factor directly activated by cAMP 2)(Epac 2) [Source:UniProtKB/Swiss-Prot;Acc:Q8WZA2]
ENST00000409036 Rap guanine nucleotide exchange factor 4 (cAMP- regulated guanine nucleotide exchange factor II)(cAMP- GEFII)(Exchange factor directly activated by cAMP 2)(Epac 2) [Source:UniProtKB/Swiss-Prot;Acc:Q8WZA2]
 
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