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AS locus structure map

HIX0002762: Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen).
Chromosome: 2 Position: 204801454..204826300 (24.8Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0002762 12-0000239 (macaque_rna)
HIX0002762 37-0000006 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000040488 ICOS 607594 Blood, adult leukocytes Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen).
HIT000040401 ICOS 607594 Blood, adult leukocytes Similar to Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen).
HIT000433851 ICOS 607594 thymus Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000058761 ICOS 607594 activated peripheral blood lymphocyte blood Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen).
HIT000246404 ICOS 607594 T-cell Inducible T-cell co-stimulator precursor (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen).

RefSeq
ID Definition
NM_012092 Homo sapiens inducible T-cell co-stimulator (ICOS), mRNA.

Ensembl
ID Definition
ENST00000316386 Inducible T-cell costimulator Precursor (Activation-inducible lymphocyte immunomediatory molecule)(CD278 antigen) [Source:UniProtKB/Swiss- Prot;Acc:Q9Y6W8]
ENST00000435193 Inducible T-cell costimulator Precursor (Activation-inducible lymphocyte immunomediatory molecule)(CD278 antigen) [Source:UniProtKB/Swiss- Prot;Acc:Q9Y6W8]
 
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