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AS locus structure map

HIX0002915: Similar to LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1) (NS21).
Chromosome: 2 Position: 232063342..232238606 (175.3Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0002915 01-0000663 (mouse_mrna)
HIX0002915 12-0000356 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000085340 ARMC9 Armadillo repeat containing 9.
HIT000010437 ARMC9 human lung Similar to Armadillo repeat containing 9.
HIT000089214 Brain, neuroblastoma Conserved hypothetical protein.
HIT000428261 ARMC9 brain fetal Similar to Armadillo repeat containing 9.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000054740 ARMC9 human esophagus tumor adult Armadillo repeat containing 9.
HIT000287892 ARMC9 Placenta Cot 25-normalized Similar to LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1) (NS21).
HIT000332825 ARMC9 Armadillo repeat containing 9.

RefSeq
ID Definition
NM_025139 Homo sapiens armadillo repeat containing 9 (ARMC9), mRNA.

Ensembl
ID Definition
ENST00000349938 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
ENST00000359743 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
ENST00000424740 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
ENST00000428662 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
ENST00000436339 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
ENST00000440107 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
ENST00000444285 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
ENST00000446447 LisH domain-containing protein ARMC9 (Melanoma/melanocyte specific protein KU-MEL-1)(NS21) [Source:UniProtKB/Swiss-Prot;Acc:Q7Z3E5]
 
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