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AS locus structure map

HIX0004173: Similar to RNA binding motif protein 47 isoform a.
Chromosome: 4 Position: 40425272..40632640 (207.4Kbp) Strand: - Number of RASVs: 6
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0004173 05-0000992 (mouse_mrna)
HIX0004173 04-0000167 (chimpanzee_rna)
HIX0004173 05-0000487 (macaque_rna)
HIX0004173 03-0000006 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000388853 RBM47 Brain, cerebellum, PCR rescued clones RNA binding motif protein 47 isoform a.
HIT000002755 RBM47 hepatoma RNA binding motif protein 47 isoform b.
HIT000013766 spleen Hypothetical short protein.
HIT000057051 RBM47 human small intestine adult Similar to RNA binding motif protein 47 isoform b.
HIT000264414 RBM47 Placenta, normal Similar to RNA binding motif protein 47 isoform a.
HIT000498830 RBM47 trachea Similar to RNA binding motif protein 47 isoform a.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000075459 RBM47 lung Similar to RNA binding motif protein 47 isoform a.
HIT000502381 RBM47 Brain, cerebellum, PCR rescued clones RNA binding motif protein 47 isoform a.

RefSeq
ID Definition
NM_019027 Homo sapiens RNA binding motif protein 47 (RBM47), transcript variant 2, mRNA.
NM_001098634 Homo sapiens RNA binding motif protein 47 (RBM47), transcript variant 1, mRNA.

Ensembl
ID Definition
ENST00000295971 RNA-binding protein 47 (RNA-binding motif protein 47) [Source:UniProtKB/Swiss-Prot;Acc:A0AV96]
ENST00000319592 RNA-binding protein 47 (RNA-binding motif protein 47) [Source:UniProtKB/Swiss-Prot;Acc:A0AV96]
ENST00000381793 RNA-binding protein 47 (RNA-binding motif protein 47) [Source:UniProtKB/Swiss-Prot;Acc:A0AV96]
ENST00000381795 RNA-binding protein 47 (RNA-binding motif protein 47) [Source:UniProtKB/Swiss-Prot;Acc:A0AV96]
 
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