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AS locus structure map

HIX0004433: Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-).
Chromosome: 4 Position: 109663203..109684235 (21.0Kbp) Strand: - Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0004433 03-0000390 (mouse_mrna)
HIX0004433 04-0000421 (chimpanzee_rna)
HIX0004433 05-0000485 (macaque_rna)
HIX0004433 32-0000151 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000039605 AGXT2L1 Brain, hypothalamus Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-).
HIT000246784 AGXT2L1 Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-).
HIT000488696 AGXT2L1 alzheimer cortex Similar to Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-).
HIT000488859 AGXT2L1 amygdala Similar to Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000016755 AGXT2L1 kidney Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-).

RefSeq
ID Definition
NM_031279 Homo sapiens alanine-glyoxylate aminotransferase 2-like 1 (AGXT2L1), transcript variant 1, mRNA.
NM_001146590 Homo sapiens alanine-glyoxylate aminotransferase 2-like 1 (AGXT2L1), transcript variant 2, mRNA.
NM_001146627 Homo sapiens alanine-glyoxylate aminotransferase 2-like 1 (AGXT2L1), transcript variant 3, mRNA.
NR_027474 Homo sapiens alanine-glyoxylate aminotransferase 2-like 1 (AGXT2L1), transcript variant 4, transcribed RNA.
NR_027475 Homo sapiens alanine-glyoxylate aminotransferase 2-like 1 (AGXT2L1), transcript variant 5, transcribed RNA.

Ensembl
ID Definition
ENST00000296486 Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q8TBG4]
ENST00000411864 Alanine--glyoxylate aminotransferase 2-like 1 (EC 2.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q8TBG4]
 
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