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AS locus structure map

HIX0004867: Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).
Chromosome: 5 Position: 54603576..54721409 (117.8Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0004867 13-0000383 (mouse_mrna)
HIX0004867 13-0000766 (mouse_mrna) low priority
HIX0004867 02-0000167 (rat_rna) low priority
HIX0004867 02-0000696 (rat_rna)
HIX0004867 05-0000162 (chimpanzee_rna)
HIX0004867 05-0000163 (chimpanzee_rna) low priority
HIX0004867 02-0000241 (dog_rna)
HIX0004867 02-0000242 (dog_rna) low priority

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000042200 SKIV2L2 myeloblast male Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).
HIT000499412 SKIV2L2 uterus Similar to Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000261821 SKIV2L2 Eye, retinoblastoma Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).
HIT000338084 SKIV2L2 Lung and heart, PCR rescued clones Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).
HIT000386962 SKIV2L2 Lung and heart, PCR rescued clones Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).
HIT000040588 SKIV2L2 Brain, hippocampus Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).
HIT000055337 SKIV2L2 endometrium carcinoma cell line adult Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).
HIT000424446 SKIV2L2 placenta Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-) (ATP-dependent helicase SKIV2L2).

RefSeq
ID Definition
NM_015360 Homo sapiens superkiller viralicidic activity 2-like 2 (S. cerevisiae) (SKIV2L2), mRNA.

Ensembl
ID Definition
ENST00000230640 Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-)(ATP-dependent helicase SKIV2L2) [Source:UniProtKB/Swiss-Prot;Acc:P42285]
ENST00000454809 Superkiller viralicidic activity 2-like 2 (EC 3.6.1.-)(ATP-dependent helicase SKIV2L2) [Source:UniProtKB/Swiss-Prot;Acc:P42285]
 
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