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AS locus structure map

HIX0005138: Similar to Protein PPRC1.
Chromosome: 5 Position: 126853309..126890782 (37.5Kbp) Strand: + Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0005138 18-0000170 (mouse_mrna)
HIX0005138 18-0000170 (rat_rna)
HIX0005138 05-0000380 (chimpanzee_rna)
HIX0005138 06-0000488 (macaque_rna)
HIX0005138 11-0000095 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000248391 PRRC1 heart Protein PPRC1.
HIT000027512 PRRC1 spinal cord adult Similar to Protein PPRC1.
HIT000248058 PRRC1 heart Similar to Protein PPRC1.
HIT000248236 PRRC1 liver Similar to Protein PPRC1.
HIT000248388 PRRC1 liver Similar to Protein PPRC1.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000014051 PRRC1 testis Protein PPRC1.
HIT000026875 PRRC1 human skeletal muscle adult Protein PPRC1.
HIT000026968 PRRC1 human bone marrow adult Protein PPRC1.
HIT000037820 PRRC1 Uterus, leiomyosarcoma Protein PPRC1.
HIT000247916 PRRC1 leukocytes peripheral blood Protein PPRC1.
HIT000248390 PRRC1 heart Protein PPRC1.

RefSeq
ID Definition
NM_130809 Homo sapiens proline-rich coiled-coil 1 (PRRC1), mRNA.

Ensembl
ID Definition
ENST00000296666 Protein PPRC1 [Source:UniProtKB/Swiss- Prot;Acc:Q96M27]
ENST00000330542 Protein PPRC1 [Source:UniProtKB/Swiss- Prot;Acc:Q96M27]
ENST00000337087 Protein PPRC1 [Source:UniProtKB/Swiss- Prot;Acc:Q96M27]
ENST00000414018 Protein PPRC1 [Source:UniProtKB/Swiss- Prot;Acc:Q96M27]
ENST00000420037 Protein PPRC1 [Source:UniProtKB/Swiss- Prot;Acc:Q96M27]
ENST00000442138 Protein PPRC1 [Source:UniProtKB/Swiss- Prot;Acc:Q96M27]
 
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