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ASローカス構造図

HIX0005252: Protocadherin gamma-A1 precursor (PCDH-gamma-A1).
染色体: 5 位置: 140710204..140892546 (182.3Kbp) ストランド: + RASVの数: 28
ORF: 完全長 不完全 NMD UTR
スプライスサイト: GT-AG GC-AG AT-AC その他 NAGNAG
AS: ASエクソン ASジャンクション 多型: SNP

ローカスと転写物の情報


ASローカス
リンク自動管理 対応する他生物ローカス
HIX0005252 18-0000001 (mouse_mrna)
HIX0005252 18-0000002 (rat_rna)
HIX0005252 05-0000490 (chimpanzee_rna)
HIX0005252 06-0000151 (macaque_rna)
HIX0005252 02-0000198 (dog_rna)

RASV
リンク自動管理 HUGO OMIM 由来細胞 発現組織 発生段階 性別 定義
HIT000000305 PCDHGA12 603059 brain male Protocadherin gamma-A12 precursor (PCDH-gamma-A12) (Cadherin-21) (Fibroblast cadherin-3).
HIT000260897 PCDHGC3 603627 Brain, anaplastic oligodendroglioma with Protocadherin gamma subfamily C, 3 isoform 3.
HIT000192062 PCDHGC3 603627 brain Similar to Protocadherin gamma subfamily C, 3 isoform 2 precursor.
HIT000053681 PCDHGB7 606304 Brain, anaplastic oligodendroglioma with Protocadherin gamma-B7 precursor (PCDH-gamma-B7).
HIT000328862 PCDHGA3 606290 brain Protocadherin gamma subfamily A, 3 isoform 1 precursor.
HIT000435515 PCDHGA6 606293 Donated clones,Novartis FGA collection Protocadherin gamma-A6 precursor (PCDH-gamma-A6).
HIT000071753 PCDHGA7 606294 brain Protocadherin gamma-A7 precursor (PCDH-gamma-A7).
HIT000435698 PCDHGB3 606301 Donated clones,Novartis FGA collection Protocadherin gamma-B3 precursor (PCDH-gamma-B3).
HIT000009462 primary human renal epithelial cells Similar to Protocadherin gamma subfamily B, 7 isoform 2 precursor.
HIT000052733 PCDHGC4 606305 Brain, anaplastic oligodendroglioma with Similar to Protocadherin gamma subfamily A, 11 isoform 3 precursor.
HIT000071744 PCDHGA1 606288 brain Protocadherin gamma-A1 precursor (PCDH-gamma-A1).
HIT000071745 PCDHGA10 606297 brain Protocadherin gamma-A10 precursor (PCDH-gamma-A10).
HIT000071746 PCDHGA11 606298 brain Protocadherin gamma-A11 precursor (PCDH-gamma-A11).
HIT000071748 PCDHGA2 606289 brain Protocadherin gamma-A2 precursor (PCDH-gamma-A2).
HIT000071750 PCDHGA4 606291 brain Protocadherin gamma-A4 precursor (PCDH-gamma-A4).
HIT000071751 PCDHGA5 606292 brain Protocadherin gamma-A5 precursor (PCDH-gamma-A5).
HIT000071754 PCDHGA8 606295 brain Protocadherin gamma-A8 precursor (PCDH-gamma-A8).
HIT000071755 PCDHGA9 606296 brain Protocadherin gamma-A9 precursor (PCDH-gamma-A9).
HIT000071756 PCDHGB1 606299 brain Protocadherin gamma-B1 precursor (PCDH-gamma-B1).
HIT000071757 PCDHGB2 606300 brain Protocadherin gamma-B2 precursor (PCDH-gamma-B2).
HIT000071759 PCDHGB4 603058 brain Protocadherin gamma-B4 precursor (PCDH-gamma-B4) (Cadherin-20) (Fibroblast cadherin-2).
HIT000071760 PCDHGB5 606302 brain Protocadherin gamma-B5 precursor (PCDH-gamma-B5).
HIT000071761 PCDHGB6 606303 brain Protocadherin gamma-B6 precursor (PCDH-gamma-B6).
HIT000071764 PCDHGC4 606305 brain Protocadherin gamma-C4 precursor (PCDH-gamma-C4).
HIT000071765 PCDHGC5 606306 brain Protocadherin gamma-C5 precursor (PCDH-gamma-C5).
HIT000071808 PCDHGA11 606298 Protocadherin gamma subfamily A, 11 isoform 3 precursor.
HIT000071813 PCDHGA3 606290 Similar to Protocadherin gamma subfamily A, 3 isoform 2 precursor.
HIT000252990 PCDHGA12 603059 Protocadherin gamma subfamily A, 12 isoform 2 precursor.

Other ASV
リンク自動管理 HUGO OMIM 由来細胞 発現組織 発生段階 性別 定義
HIT000071747 PCDHGA12 603059 brain Protocadherin gamma-A12 precursor (PCDH-gamma-A12) (Cadherin-21) (Fibroblast cadherin-3).
HIT000032835 PCDHGC3 603627 Muscle, rhabdomyosarcoma Protocadherin gamma subfamily C, 3 isoform 3.
HIT000040259 PCDHGC3 603627 Brain, anaplastic oligodendroglioma with Protocadherin gamma subfamily C, 3 isoform 3.
HIT000038619 PCDHGC3 603627 Skin, melanotic melanoma. Protocadherin gamma-C3 precursor (PCDH-gamma-C3) (Protocadherin-43) (PC-43) (Protocadherin-2).
HIT000040148 PCDHGC3 603627 Brain, anaplastic oligodendroglioma with Protocadherin gamma-C3 precursor (PCDH-gamma-C3) (Protocadherin-43) (PC-43) (Protocadherin-2).
HIT000071763 PCDHGC3 603627 brain Protocadherin gamma-C3 precursor (PCDH-gamma-C3) (Protocadherin-43) (PC-43) (Protocadherin-2).
HIT000071762 PCDHGB7 606304 brain Protocadherin gamma-B7 precursor (PCDH-gamma-B7).
HIT000071749 PCDHGA3 606290 brain Protocadherin gamma-A3 precursor (PCDH-gamma-A3).
HIT000071752 PCDHGA6 606293 brain Protocadherin gamma-A6 precursor (PCDH-gamma-A6).
HIT000329113 PCDHGA6 606293 brain Protocadherin gamma-A6 precursor (PCDH-gamma-A6).
HIT000328893 PCDHGA7 606294 brain Similar to Protocadherin gamma-A7 precursor (PCDH-gamma-A7).
HIT000071758 PCDHGB3 606301 brain Protocadherin gamma-B3 precursor (PCDH-gamma-B3).

RefSeq
ID 定義
NM_002588 Homo sapiens protocadherin gamma subfamily C, 3 (PCDHGC3), transcript variant 1, mRNA.
NM_003735 Homo sapiens protocadherin gamma subfamily A, 12 (PCDHGA12), transcript variant 1, mRNA.
NM_003736 Homo sapiens protocadherin gamma subfamily B, 4 (PCDHGB4), transcript variant 1, mRNA.
NM_014004 Homo sapiens protocadherin gamma subfamily A, 8 (PCDHGA8), transcript variant 2, mRNA.
NM_018912 Homo sapiens protocadherin gamma subfamily A, 1 (PCDHGA1), transcript variant 1, mRNA.
NM_018913 Homo sapiens protocadherin gamma subfamily A, 10 (PCDHGA10), transcript variant 1, mRNA.
NM_018914 Homo sapiens protocadherin gamma subfamily A, 11 (PCDHGA11), transcript variant 1, mRNA.
NM_018915 Homo sapiens protocadherin gamma subfamily A, 2 (PCDHGA2), transcript variant 1, mRNA.
NM_018916 Homo sapiens protocadherin gamma subfamily A, 3 (PCDHGA3), transcript variant 1, mRNA.
NM_018917 Homo sapiens protocadherin gamma subfamily A, 4 (PCDHGA4), transcript variant 1, mRNA.
NM_018918 Homo sapiens protocadherin gamma subfamily A, 5 (PCDHGA5), transcript variant 1, mRNA.
NM_018919 Homo sapiens protocadherin gamma subfamily A, 6 (PCDHGA6), transcript variant 1, mRNA.
NM_018920 Homo sapiens protocadherin gamma subfamily A, 7 (PCDHGA7), transcript variant 1, mRNA.
NM_018921 Homo sapiens protocadherin gamma subfamily A, 9 (PCDHGA9), transcript variant 1, mRNA.
NM_018922 Homo sapiens protocadherin gamma subfamily B, 1 (PCDHGB1), transcript variant 1, mRNA.
NM_018923 Homo sapiens protocadherin gamma subfamily B, 2 (PCDHGB2), transcript variant 1, mRNA.
NM_018924 Homo sapiens protocadherin gamma subfamily B, 3 (PCDHGB3), transcript variant 1, mRNA.
NM_018925 Homo sapiens protocadherin gamma subfamily B, 5 (PCDHGB5), transcript variant 1, mRNA.
NM_018926 Homo sapiens protocadherin gamma subfamily B, 6 (PCDHGB6), transcript variant 1, mRNA.
NM_018927 Homo sapiens protocadherin gamma subfamily B, 7 (PCDHGB7), transcript variant 1, mRNA.
NM_018928 Homo sapiens protocadherin gamma subfamily C, 4 (PCDHGC4), transcript variant 1, mRNA.
NM_018929 Homo sapiens protocadherin gamma subfamily C, 5 (PCDHGC5), transcript variant 1, mRNA.
NM_031993 Homo sapiens protocadherin gamma subfamily A, 1 (PCDHGA1), transcript variant 2, mRNA.
NM_032009 Homo sapiens protocadherin gamma subfamily A, 2 (PCDHGA2), transcript variant 2, mRNA.
NM_032011 Homo sapiens protocadherin gamma subfamily A, 3 (PCDHGA3), transcript variant 2, mRNA.
NM_032053 Homo sapiens protocadherin gamma subfamily A, 4 (PCDHGA4), transcript variant 2, mRNA.
NM_032054 Homo sapiens protocadherin gamma subfamily A, 5 (PCDHGA5), transcript variant 2, mRNA.
NM_032086 Homo sapiens protocadherin gamma subfamily A, 6 (PCDHGA6), transcript variant 2, mRNA.
NM_032087 Homo sapiens protocadherin gamma subfamily A, 7 (PCDHGA7), transcript variant 2, mRNA.
NM_032088 Homo sapiens protocadherin gamma subfamily A, 8 (PCDHGA8), transcript variant 1, mRNA.
NM_032089 Homo sapiens protocadherin gamma subfamily A, 9 (PCDHGA9), transcript variant 2, mRNA.
NM_032090 Homo sapiens protocadherin gamma subfamily A, 10 (PCDHGA10), transcript variant 2, mRNA.
NM_032091 Homo sapiens protocadherin gamma subfamily A, 11 (PCDHGA11), transcript variant 2, mRNA.
NM_032092 Homo sapiens protocadherin gamma subfamily A, 11 (PCDHGA11), transcript variant 3, mRNA.
NM_032094 Homo sapiens protocadherin gamma subfamily A, 12 (PCDHGA12), transcript variant 2, mRNA.
NM_032095 Homo sapiens protocadherin gamma subfamily B, 1 (PCDHGB1), transcript variant 2, mRNA.
NM_032096 Homo sapiens protocadherin gamma subfamily B, 2 (PCDHGB2), transcript variant 2, mRNA.
NM_032097 Homo sapiens protocadherin gamma subfamily B, 3 (PCDHGB3), transcript variant 2, mRNA.
NM_032098 Homo sapiens protocadherin gamma subfamily B, 4 (PCDHGB4), transcript variant 2, mRNA.
NM_032099 Homo sapiens protocadherin gamma subfamily B, 5 (PCDHGB5), transcript variant 2, mRNA.
NM_032100 Homo sapiens protocadherin gamma subfamily B, 6 (PCDHGB6), transcript variant 2, mRNA.
NM_032101 Homo sapiens protocadherin gamma subfamily B, 7 (PCDHGB7), transcript variant 2, mRNA.
NM_032402 Homo sapiens protocadherin gamma subfamily C, 3 (PCDHGC3), transcript variant 2, mRNA.
NM_032403 Homo sapiens protocadherin gamma subfamily C, 3 (PCDHGC3), transcript variant 3, mRNA.
NM_032406 Homo sapiens protocadherin gamma subfamily C, 4 (PCDHGC4), transcript variant 2, mRNA.
NM_032407 Homo sapiens protocadherin gamma subfamily C, 5 (PCDHGC5), transcript variant 2, mRNA.

Ensembl
ID 定義
ENST00000252085 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000252087 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000253812 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000305759 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000306593 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000308177 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000378105 Protocadherin gamma-A1 Precursor (PCDH-gamma-A1) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H4]
ENST00000394576 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000398587 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000398594 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000398604 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
ENST00000398610 Protocadherin gamma-A2 Precursor (PCDH-gamma-A2) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y5H1]
 
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