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AS locus structure map

HIX0005625: TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
Chromosome: 6 Position: 24650205..24667318 (17.1Kbp) Strand: - Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0005625 13-0000213 (mouse_mrna)
HIX0005625 17-0000223 (rat_rna)
HIX0005625 06-0000130 (chimpanzee_rna)
HIX0005625 35-0000097 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000339533 TDP2 605764 Duodenum, adenocarcinoma TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000271831 TDP2 605764 Fetal liver Similar to TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000281224 TDP2 605764 Placenta Cot 25-normalized Similar to TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000427702 TDP2 605764 brain Similar to TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000491247 TDP2 605764 colon Similar to TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000038043 TDP2 605764 Skin, melanotic melanoma. TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000073773 TDP2 605764 TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000246138 TDP2 605764 TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000274839 TDP2 605764 Placenta Cot 25-normalized TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000276488 TDP2 605764 HeLa cells Cot 25-normalized TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000280498 TDP2 605764 Adult brain TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000002344 TDP2 605764 adrenal gland TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000004642 TDP2 605764 placenta TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).
HIT000493323 TDP2 605764 neutrophils TRAF and TNF receptor-associated protein (ETS1-associated protein 2) (ETS1-associated protein II) (EAPII).

RefSeq
ID Definition
NM_016614 Homo sapiens TRAF and TNF receptor associated protein (TTRAP), mRNA.

Ensembl
ID Definition
ENST00000378198 TRAF and TNF receptor-associated protein (ETS1- associated protein 2)(ETS1-associated protein II)(EAPII) [Source:UniProtKB/Swiss-Prot;Acc:O95551]
ENST00000341060 TRAF and TNF receptor-associated protein (ETS1- associated protein 2)(ETS1-associated protein II)(EAPII) [Source:UniProtKB/Swiss-Prot;Acc:O95551]
 
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