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AS locus structure map

HIX0005939: G-protein coupled receptor 116.
Chromosome: 6 Position: 46820246..46922680 (102.4Kbp) Strand: - Number of RASVs: 6
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0005939 06-0000474 (chimpanzee_rna)
HIX0005939 04-0000194 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000422300 GPR116 cerebellum G-protein coupled receptor 116.
HIT000254976 GPR116 brain G-protein coupled receptor 116.
HIT000016910 GPR116 normal mesangial cells (NHMC56046-2) Similar to G-protein coupled receptor 116.
HIT000027037 GPR116 human cervix adult Similar to G-protein coupled receptor 116.
HIT000334058 GPR116 Testis Similar to G-protein coupled receptor 116.
HIT000495004 GPR116 placenta Similar to G-protein coupled receptor 116.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000000483 GPR116 brain G-protein coupled receptor 116.
HIT000241953 GPR116 G-protein coupled receptor 116.
HIT000262118 GPR116 Testis G-protein coupled receptor 116.

RefSeq
ID Definition
NM_015234 Homo sapiens G protein-coupled receptor 116 (GPR116), transcript variant 1, mRNA.
NM_001098518 Homo sapiens G protein-coupled receptor 116 (GPR116), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000265417 Probable G-protein coupled receptor 116 Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q8IZF2]
ENST00000283296 Probable G-protein coupled receptor 116 Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q8IZF2]
ENST00000362015 Probable G-protein coupled receptor 116 Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q8IZF2]
ENST00000452370 Probable G-protein coupled receptor 116 Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q8IZF2]
ENST00000456426 Probable G-protein coupled receptor 116 Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q8IZF2]
 
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