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AS locus structure map

HIX0006170: Transcription cofactor vestigial-like protein 2 (Vgl-2) (Protein VITO1).
Chromosome: 6 Position: 117586721..117594728 (8.0Kbp) Strand: + Number of RASVs: 2
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0006170 10-0000258 (mouse_mrna)
HIX0006170 06-0000686 (chimpanzee_rna)
HIX0006170 04-0000989 (macaque_rna)
HIX0006170 01-0000286 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000248910 VGLL2 609979 Transcription cofactor vestigial-like protein 2 (Vgl-2) (Protein VITO1).
HIT000336226 VGLL2 609979 PCR rescued clones Vestigial-like 2 isoform 2.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000021733 VGLL2 609979 skeletal muscle Transcription cofactor vestigial-like protein 2 (Vgl-2) (Protein VITO1).
HIT000083957 VGLL2 609979 Vestigial-like 2 isoform 2.
HIT000263468 VGLL2 609979 PCR rescued clones Vestigial-like 2 isoform 2.
HIT000336225 VGLL2 609979 PCR rescued clones Vestigial-like 2 isoform 2.
HIT000387838 VGLL2 609979 PCR rescued clones Vestigial-like 2 isoform 2.
HIT000387883 VGLL2 609979 PCR rescued clones Vestigial-like 2 isoform 2.

RefSeq
ID Definition
NM_182645 Homo sapiens vestigial like 2 (Drosophila) (VGLL2), transcript variant 1, mRNA.
NM_153453 Homo sapiens vestigial like 2 (Drosophila) (VGLL2), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000326274 Transcription cofactor vestigial-like protein 2 (Vgl-2)(Protein VITO1) [Source:UniProtKB/Swiss- Prot;Acc:Q8N8G2]
ENST00000352536 Transcription cofactor vestigial-like protein 2 (Vgl-2)(Protein VITO1) [Source:UniProtKB/Swiss- Prot;Acc:Q8N8G2]
ENST00000428916 Transcription cofactor vestigial-like protein 2 (Vgl-2)(Protein VITO1) [Source:UniProtKB/Swiss- Prot;Acc:Q8N8G2]
 
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