HIX0008250: Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog).
Chromosome: 9
Position: 106856541..106903700 (47.2Kbp)
Strand: +
Number of RASVs: 6
ORF:
Full-length
Truncated
NMD
UTR
Splice-site:
GT-AG
GC-AG
AT-AC
Other
NAGNAG
AS:
AS exon
AS junction
Polymorphism:
SNP
Locus and transcript information
AS locus
RASV
Hyperlink management |
HUGO |
OMIM |
Cell type |
Tissue type |
Development stage |
Sex |
Definition |
HIT000003959 |
SMC2 |
605576 |
teratocarcinoma |
|
|
|
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
HIT000425396 |
SMC2 |
605576 |
|
testis |
|
|
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
HIT000068366 |
SMC2 |
605576 |
|
teratocarcinoma |
|
|
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
HIT000259485 |
SMC2 |
605576 |
|
Pooled, 40 cell lines |
|
|
Similar to Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
HIT000332231 |
SMC2 |
605576 |
|
|
|
|
Similar to Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
HIT000502593 |
SMC2 |
605576 |
|
Brain, cerebellum, PCR rescued clones |
|
|
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
Other ASV
Hyperlink management |
HUGO |
OMIM |
Cell type |
Tissue type |
Development stage |
Sex |
Definition |
HIT000264570 |
SMC2 |
605576 |
|
Brain, glioblastoma |
|
|
Similar to Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
HIT000390175 |
SMC2 |
605576 |
|
Brain, cerebellum, PCR rescued clones |
|
|
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
HIT000028103 |
SMC2 |
605576 |
|
lymph node |
adult |
|
Similar to Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog). |
RefSeq
ID |
Definition |
NM_006444 |
Homo sapiens structural maintenance of chromosomes 2 (SMC2), transcript variant 3, mRNA. |
NM_001042550 |
Homo sapiens structural maintenance of chromosomes 2 (SMC2), transcript variant 1, mRNA. |
NM_001042551 |
Homo sapiens structural maintenance of chromosomes 2 (SMC2), transcript variant 2, mRNA. |
Ensembl
ID |
Definition |
ENST00000286398 |
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E)(hCAP-E)(XCAP-E homolog) [Source:UniProtKB/Swiss-Prot;Acc:O95347] |
ENST00000374787 |
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E)(hCAP-E)(XCAP-E homolog) [Source:UniProtKB/Swiss-Prot;Acc:O95347] |
ENST00000374793 |
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E)(hCAP-E)(XCAP-E homolog) [Source:UniProtKB/Swiss-Prot;Acc:O95347] |
ENST00000303219 |
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E)(hCAP-E)(XCAP-E homolog) [Source:UniProtKB/Swiss-Prot;Acc:O95347] |
ENST00000440179 |
Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E)(hCAP-E)(XCAP-E homolog) [Source:UniProtKB/Swiss-Prot;Acc:O95347] |