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AS locus structure map

HIX0011598: Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
Chromosome: 14 Position: 35747839..35786699 (38.9Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0011598 14-0000142 (chimpanzee_rna)
HIX0011598 07-0000132 (macaque_rna)
HIX0011598 08-0000142 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000038178 PSMA6 602855 Brain, primitive neuroectodermal Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000496632 602855 testis Similar to Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000493544 602855 teratocarcinoma Similar to Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000031331 PSMA6 602855 Lymph, Burkitt lymphoma Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000039494 PSMA6 602855 Skeletal Muscle Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000050864 PSMA6 602855 Skin, melanotic melanoma, high MDR. Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000264095 PSMA6 602855 Pooled, 40 cell lines Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000267794 PSMA6 602855 Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000271674 PSMA6 602855 Neuroblastoma Cot 25-normalized Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000272610 PSMA6 602855 Neuroblastoma Cot 10-normalized Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000273089 PSMA6 602855 Placenta Cot 25-normalized Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000285587 PSMA6 602855 Neuroblastoma Cot 50-normalized Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000295571 PSMA6 602855 T cells (Jurkat cell line) Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000296116 PSMA6 602855 Placenta Cot 25-normalized Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000322320 PSMA6 602855 Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000431877 PSMA6 602855 cerebellum Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000322499 602855 Similar to Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).
HIT000499836 602855 teratocarcinoma Similar to Proteasome subunit alpha type-6 (EC 3.4.25.1) (Proteasome iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K).

RefSeq
ID Definition
NM_002791 Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 (PSMA6), mRNA.

Ensembl
ID Definition
ENST00000261479 Proteasome subunit alpha type-6 (EC 3.4.25.1)(Proteasome iota chain)(Macropain iota chain)(Multicatalytic endopeptidase complex iota chain)(27 kDa prosomal protein)(PROS-27)(p27K) [Source:UniProtKB/Swiss-Prot;Acc:P60900]
 
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