HIX0012904: Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26) (Glycine-tryptophan protein of 182 kDa) (GW182 autoantigen) (Protein GW1) (EMSY interactor protein).
Chromosome: 16 Position: 24741016..24837546 (96.5Kbp) Strand: + Number of RASVs: 3
Chromosome: 16 Position: 24741016..24837546 (96.5Kbp) Strand: + Number of RASVs: 3
ORF:
Full-length
Truncated
NMD
UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP
Locus and transcript information
AS locus
| Hyperlink management | Corresponding other species locus |
|---|---|
| HIX0012904 | 07-0000761 (mouse_mrna) |
| HIX0012904 | 01-0002115 (rat_rna) |
| HIX0012904 | 20-0000161 (macaque_rna) |
RASV
| Hyperlink management | HUGO | OMIM | Cell type | Tissue type | Development stage | Sex | Definition |
|---|---|---|---|---|---|---|---|
| HIT000019397 | TNRC6A | 610739 | amygdala | Similar to Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26) (Glycine-tryptophan protein of 182 kDa) (GW182 autoantigen) (Protein GW1) (EMSY interactor protein). | |||
| HIT000026675 | TNRC6A | 610739 | kidney | fetal | Similar to Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26) (Glycine-tryptophan protein of 182 kDa) (GW182 autoantigen) (Protein GW1) (EMSY interactor protein). | ||
| HIT000262974 | TNRC6A | 610739 | Peripheral Nervous System, sympathetic | Similar to Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26) (Glycine-tryptophan protein of 182 kDa) (GW182 autoantigen) (Protein GW1) (EMSY interactor protein). |
Other ASV
| Hyperlink management | HUGO | OMIM | Cell type | Tissue type | Development stage | Sex | Definition |
|---|
RefSeq
| ID | Definition |
|---|---|
| NM_014494 | Homo sapiens trinucleotide repeat containing 6A (TNRC6A), mRNA. |
Ensembl
| ID | Definition |
|---|---|
| ENST00000395799 | Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26)(Glycine-tryptophan protein of 182 kDa)(GW182 autoantigen)(Protein GW1)(EMSY interactor protein) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDV7] |
| ENST00000315183 | Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26)(Glycine-tryptophan protein of 182 kDa)(GW182 autoantigen)(Protein GW1)(EMSY interactor protein) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDV7] |
| ENST00000338120 | Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26)(Glycine-tryptophan protein of 182 kDa)(GW182 autoantigen)(Protein GW1)(EMSY interactor protein) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDV7] |
| ENST00000352205 | Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26)(Glycine-tryptophan protein of 182 kDa)(GW182 autoantigen)(Protein GW1)(EMSY interactor protein) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDV7] |
| ENST00000395801 | Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26)(Glycine-tryptophan protein of 182 kDa)(GW182 autoantigen)(Protein GW1)(EMSY interactor protein) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDV7] |
| ENST00000432286 | Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26)(Glycine-tryptophan protein of 182 kDa)(GW182 autoantigen)(Protein GW1)(EMSY interactor protein) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDV7] |
| ENST00000450465 | Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26)(Glycine-tryptophan protein of 182 kDa)(GW182 autoantigen)(Protein GW1)(EMSY interactor protein) [Source:UniProtKB/Swiss-Prot;Acc:Q8NDV7] |
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