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AS locus structure map

HIX0013037: Protein fatso (Fat mass and obesity-associated protein).
Chromosome: 16 Position: 53737875..54148381 (410.5Kbp) Strand: + Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0013037 08-0000266 (mouse_mrna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000021409 FTO 612938 brain fetal Protein fatso (Fat mass and obesity-associated protein).
HIT000092235 FTO 612938 Cervix, carcinoma Similar to Protein fatso (Fat mass and obesity-associated protein).
HIT000390945 FTO 612938 Lung, PCR rescued clones Similar to Protein fatso (Fat mass and obesity-associated protein).
HIT000489820 FTO 612938 brain Similar to Protein fatso (Fat mass and obesity-associated protein).
HIT000501059 FTO 612938 Lung, PCR rescued clones Similar to Protein fatso (Fat mass and obesity-associated protein).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000001468 FTO 612938 Protein fatso (Fat mass and obesity-associated protein).

RefSeq
ID Definition
NM_001080432 Homo sapiens fat mass and obesity associated (FTO), mRNA.

Ensembl
ID Definition
ENST00000268349 Protein fto (Fat mass and obesity-associated protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9C0B1]
ENST00000394645 Protein fto (Fat mass and obesity-associated protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9C0B1]
ENST00000394647 Protein fto (Fat mass and obesity-associated protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9C0B1]
ENST00000431610 Protein fto (Fat mass and obesity-associated protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9C0B1]
 
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