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AS locus structure map

HIX0013500: Tumor necrosis factor ligand superfamily, member 13 isoform gamma proprotein.
Chromosome: 17 Position: 7461609..7464925 (3.3Kbp) Strand: + Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0013500 11-0000199 (mouse_mrna)
HIX0013500 10-0000280 (rat_rna)
HIX0013500 16-0000507 (macaque_rna)
HIX0013500 05-0000359 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000015565 TNFSF13 604472 cerebellum Tumor necrosis factor ligand superfamily, member 13 isoform beta proprotein.
HIT000069829 TNFSF13 604472 Tumor necrosis factor ligand superfamily, member 13 isoform gamma proprotein.
HIT000252924 TNFSF13 604472 Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000495845 spleen Similar to TNFSF12-TNFSF13 protein.
HIT000468754 TNFSF13 604472 Similar to TNFSF12-TNFSF13 protein.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000069828 TNFSF13 604472 Tumor necrosis factor ligand superfamily, member 13 isoform beta proprotein.
HIT000033609 TNFSF13 604472 Ovary, adenocarcinoma Tumor necrosis factor ligand superfamily, member 13 isoform gamma proprotein.
HIT000064015 TNFSF13 604472 uterus Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000069827 TNFSF13 604472 Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000071075 TNFSF13 604472 leukocyte Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000072890 TNFSF13 604472 Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000084236 TNFSF13 604472 Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000266554 TNFSF13 604472 Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000433384 TNFSF13 604472 colon Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000266555 TNFSF13 604472 Similar to TNFSF12-TNFSF13 protein.
HIT000268909 TNFSF13 604472 Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000268942 TNFSF13 604472 Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000384686 TNFSF13 604472 kidney Tumor necrosis factor ligand superfamily member 13 precursor (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD256 antigen).
HIT000342023 TNFSF13 604472 Similar to TNFSF12-TNFSF13 protein.

RefSeq
ID Definition
NM_003808 Homo sapiens tumor necrosis factor (ligand) superfamily, member 13 (TNFSF13), transcript variant alpha, mRNA.
NM_172087 Homo sapiens tumor necrosis factor (ligand) superfamily, member 13 (TNFSF13), transcript variant beta, mRNA.
NM_172088 Homo sapiens tumor necrosis factor (ligand) superfamily, member 13 (TNFSF13), transcript variant gamma, mRNA.

Ensembl
ID Definition
ENST00000338784 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis)(TWEAK)(APO3 ligand) [Contains Tumor necrosis factor ligand superfamily member 12, membrane form;Tumor necrosis factor ligand superfamily member 12, secreted form] [Source:UniProtKB/Swiss-Prot;Acc:O43508]
ENST00000349228 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis)(TWEAK)(APO3 ligand) [Contains Tumor necrosis factor ligand superfamily member 12, membrane form;Tumor necrosis factor ligand superfamily member 12, secreted form] [Source:UniProtKB/Swiss-Prot;Acc:O43508]
ENST00000396545 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis)(TWEAK)(APO3 ligand) [Contains Tumor necrosis factor ligand superfamily member 12, membrane form;Tumor necrosis factor ligand superfamily member 12, secreted form] [Source:UniProtKB/Swiss-Prot;Acc:O43508]
ENST00000380535 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis)(TWEAK)(APO3 ligand) [Contains Tumor necrosis factor ligand superfamily member 12, membrane form;Tumor necrosis factor ligand superfamily member 12, secreted form] [Source:UniProtKB/Swiss-Prot;Acc:O43508]
ENST00000396542 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis)(TWEAK)(APO3 ligand) [Contains Tumor necrosis factor ligand superfamily member 12, membrane form;Tumor necrosis factor ligand superfamily member 12, secreted form] [Source:UniProtKB/Swiss-Prot;Acc:O43508]
ENST00000436057 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis)(TWEAK)(APO3 ligand) [Contains Tumor necrosis factor ligand superfamily member 12, membrane form;Tumor necrosis factor ligand superfamily member 12, secreted form] [Source:UniProtKB/Swiss-Prot;Acc:O43508]
ENST00000438470 Tumor necrosis factor ligand superfamily member 12 (TNF-related weak inducer of apoptosis)(TWEAK)(APO3 ligand) [Contains Tumor necrosis factor ligand superfamily member 12, membrane form;Tumor necrosis factor ligand superfamily member 12, secreted form] [Source:UniProtKB/Swiss-Prot;Acc:O43508]
 
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