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AS locus structure map

HIX0013690: U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
Chromosome: 17 Position: 30190190..30228761 (38.6Kbp) Strand: - Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0013690 11-0001078 (mouse_mrna)
HIX0013690 16-0000182 (macaque_rna)
HIX0013690 09-0000641 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000051370 UTP6 Colon, Kidney, Stomach, adult, whole pooled U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000499542 UTP6 cerebellum Similar to U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000046437 UTP6 bladder Similar to U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000286927 UTP6 Neuroblastoma Cot 25-normalized Similar to U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000077788 UTP6 U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000304921 UTP6 Fetal brain U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000013816 UTP6 synovial membrane tissue from rheumatioid U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000074873 UTP6 hepatocellular carcinoma U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000088695 UTP6 Prostate, adenocarcinoma. Similar to U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000384578 UTP6 small intestine U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).
HIT000494430 UTP6 brain fetal Similar to U3 small nucleolar RNA-associated protein 6 homolog (Multiple hat domains protein) (Hepatocellular carcinoma-associated antigen 66).

RefSeq
ID Definition
NM_018428 Homo sapiens UTP6, small subunit (SSU) processome component, homolog (yeast) (UTP6), mRNA.

Ensembl
ID Definition
ENST00000261708 U3 small nucleolar RNA-associated protein 6 homolog (Hepatocellular carcinoma-associated antigen 66)(Multiple hat domains protein) [Source:UniProtKB/Swiss- Prot;Acc:Q9NYH9]
 
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