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AS locus structure map

HIX0013701: Ras homolog gene family, member T1 isoform 1.
Chromosome: 17 Position: 30469473..30552789 (83.3Kbp) Strand: + Number of RASVs: 9
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0013701 11-0000343 (mouse_mrna)
HIX0013701 10-0000275 (rat_rna)
HIX0013701 17-0000341 (chimpanzee_rna)
HIX0013701 16-0000015 (macaque_rna)
HIX0013701 09-0000633 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000388557 RHOT1 PCR rescued clones Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000248295 RHOT1 Ras homolog gene family, member T1 isoform 1.
HIT000025525 RHOT1 uterus adult Similar to Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000088782 RHOT1 Uterus, leiomyosarcoma Similar to Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000091679 RHOT1 Colon, Kidney, Stomach, adult, whole pooled Similar to Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000263021 RHOT1 Testis Similar to Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000334380 RHOT1 Peripheral Nervous System, dorsal root Similar to Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000339785 RHOT1 Skin, melanotic melanoma. Similar to Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000489031 RHOT1 amygdala Similar to Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000096585 RHOT1 Brain, anaplastic oligodendroglioma with Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000388558 RHOT1 PCR rescued clones Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000248395 RHOT1 Similar to Ras homolog gene family, member T1 isoform 1.
HIT000260083 RHOT1 Testis Mitochondrial Rho GTPase 1 (EC 3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family member T1) (Rac-GTP-binding protein-like protein).
HIT000250699 RHOT1 brain fetal Ras homolog gene family, member T1 isoform 1.

RefSeq
ID Definition
NM_018307 Homo sapiens ras homolog gene family, member T1 (RHOT1), transcript variant 3, mRNA.
NM_001033566 Homo sapiens ras homolog gene family, member T1 (RHOT1), transcript variant 2, mRNA.
NM_001033568 Homo sapiens ras homolog gene family, member T1 (RHOT1), transcript variant 1, mRNA.

Ensembl
ID Definition
ENST00000333942 Mitochondrial Rho GTPase 1 (hMiro-1)(MIRO-1)(EC 3.6.5.-)(Ras homolog gene family member T1)(Rac-GTP- binding protein-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q8IXI2]
ENST00000354266 Mitochondrial Rho GTPase 1 (hMiro-1)(MIRO-1)(EC 3.6.5.-)(Ras homolog gene family member T1)(Rac-GTP- binding protein-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q8IXI2]
ENST00000358365 Mitochondrial Rho GTPase 1 (hMiro-1)(MIRO-1)(EC 3.6.5.-)(Ras homolog gene family member T1)(Rac-GTP- binding protein-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q8IXI2]
ENST00000394692 Mitochondrial Rho GTPase 1 (hMiro-1)(MIRO-1)(EC 3.6.5.-)(Ras homolog gene family member T1)(Rac-GTP- binding protein-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q8IXI2]
 
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