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AS locus structure map

HIX0013704: 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
Chromosome: 17 Position: 30771492..30808489 (37.0Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0013704 11-0000715 (mouse_mrna)
HIX0013704 09-0000629 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000291145 PSMD11 604449 Placenta Cot 25-normalized 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000018469 PSMD11 604449 thymus Similar to 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000423399 PSMD11 604449 heart 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000494966 PSMD11 604449 placenta Similar to Proteasome 26S non-ATPase subunit 11.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000029623 PSMD11 604449 Lung, small cell carcinoma 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000031936 PSMD11 604449 Lung, small cell carcinoma 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000058008 PSMD11 604449 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000276341 PSMD11 604449 Placenta Cot 25-normalized 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000279966 PSMD11 604449 Placenta Cot 25-normalized 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000300943 PSMD11 604449 B cells (Ramos cell line) Cot 25-normalized 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000061621 PSMD11 604449 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000270166 PSMD11 604449 Placenta Cot 25-normalized Similar to 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5).
HIT000330976 PSMD11 604449 pancreas Similar to Proteasome 26S non-ATPase subunit 11 variant (Fragment).

RefSeq
ID Definition
NM_002815 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 (PSMD11), mRNA.

Ensembl
ID Definition
ENST00000261712 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9)(26S proteasome regulatory subunit p44.5) [Source:UniProtKB/Swiss- Prot;Acc:O00231]
ENST00000457654 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit S9)(26S proteasome regulatory subunit p44.5) [Source:UniProtKB/Swiss- Prot;Acc:O00231]
 
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