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AS locus structure map

HIX0013960: Prohibitin.
Chromosome: 17 Position: 47481417..47492242 (10.8Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0013960 11-0000521 (mouse_mrna)
HIX0013960 16-0000101 (macaque_rna)
HIX0013960 09-0000500 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000305380 PHB 176705 T cells (Jurkat cell line) Cot 10-normalized Prohibitin.
HIT000426633 PHB 176705 alzheimer cortex Similar to Prohibitin.
HIT000496882 PHB 176705 testis Similar to Prohibitin.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000036250 PHB 176705 Muscle, rhabdomyosarcoma Prohibitin.
HIT000217226 PHB 176705 Prohibitin.
HIT000269458 PHB 176705 Neuroblastoma Cot 50-normalized Prohibitin.
HIT000270244 PHB 176705 HeLa cells Cot 25-normalized Prohibitin.
HIT000278828 PHB 176705 T cells (Jurkat cell line) Cot 10-normalized Prohibitin.
HIT000278982 PHB 176705 B cells (Ramos cell line) Cot 25-normalized Prohibitin.
HIT000279996 PHB 176705 Neuroblastoma Cot 25-normalized Prohibitin.
HIT000280821 PHB 176705 HeLa cells Cot 25-normalized Prohibitin.
HIT000296945 PHB 176705 Fetal liver Prohibitin.
HIT000297679 PHB 176705 B cells (Ramos cell line) Prohibitin.
HIT000298776 PHB 176705 Placenta Prohibitin.
HIT000298880 PHB 176705 Placenta Cot 25-normalized Prohibitin.
HIT000300485 PHB 176705 HeLa cells Cot 25-normalized Prohibitin.
HIT000335253 PHB 176705 Chondrosarcoma Lung Metastasis Prohibitin.
HIT000423563 PHB 176705 neuroblastoma Prohibitin.
HIT000431515 PHB 176705 neuroblastoma Prohibitin.
HIT000330961 PHB 176705 human lung Similar to Prohibitin variant (Fragment).

RefSeq
ID Definition
NM_002634 Homo sapiens prohibitin (PHB), mRNA.

Ensembl
ID Definition
ENST00000300408 Prohibitin [Source:UniProtKB/Swiss- Prot;Acc:P35232]
ENST00000393345 Prohibitin [Source:UniProtKB/Swiss- Prot;Acc:P35232]
ENST00000419140 Prohibitin [Source:UniProtKB/Swiss- Prot;Acc:P35232]
ENST00000434917 Prohibitin [Source:UniProtKB/Swiss- Prot;Acc:P35232]
ENST00000446735 Prohibitin [Source:UniProtKB/Swiss- Prot;Acc:P35232]
 
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