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AS locus structure map

HIX0014446: Myosin-Vb.
Chromosome: 18 Position: 47349101..47721451 (372.4Kbp) Strand: - Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0014446 18-0000388 (mouse_mrna)
HIX0014446 18-0000373 (rat_rna)
HIX0014446 18-0000149 (chimpanzee_rna)
HIX0014446 18-0000114 (macaque_rna)
HIX0014446 07-0000548 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000409105 MYO5B 606540 brain Myosin-Vb.
HIT000018016 MYO5B 606540 testis Similar to Myosin VB.
HIT000271496 MYO5B 606540 HeLa cells Cot 25-normalized Similar to Myosin VB.
HIT000008610 MYO5B 606540 colon Similar to Myosin VB.
HIT000496600 MYO5B 606540 testis Similar to Myosin VB.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000000836 MYO5B 606540 brain adult male Myosin-Vb.
HIT000085685 MYO5B 606540 Similar to Myosin VB.
HIT000093119 MYO5B 606540 Colon, Kidney, Stomach, adult, whole pooled Similar to Myosin VB.

RefSeq
ID Definition
NM_001080467 Homo sapiens myosin VB (MYO5B), mRNA.

Ensembl
ID Definition
ENST00000285039 Myosin-Vb [Source:UniProtKB/Swiss- Prot;Acc:Q9ULV0]
ENST00000324581 Myosin-Vb [Source:UniProtKB/Swiss- Prot;Acc:Q9ULV0]
ENST00000356732 Myosin-Vb [Source:UniProtKB/Swiss- Prot;Acc:Q9ULV0]
 
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