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AS locus structure map

HIX0014575: ATP synthase subunit delta, mitochondrial precursor.
Chromosome: 19 Position: 1237778..1244824 (7.0Kbp) Strand: + Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0014575 10-0000286 (mouse_mrna)
HIX0014575 19-0000502 (macaque_rna)
HIX0014575 20-0000756 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000367364 ATP5D 603150 ATP synthase subunit delta, mitochondrial precursor.
HIT000367365 ATP5D 603150 ATP synthase subunit delta, mitochondrial precursor.
HIT000099202 ATP5D 603150 Brain, fetal, whole pooled Similar to ATP synthase subunit delta, mitochondrial precursor.
HIT000259937 ATP5D 603150 Pancreas, Spleen, adult pooled Similar to ATP synthase subunit delta, mitochondrial precursor.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000030853 ATP5D 603150 Lung, small cell carcinoma ATP synthase subunit delta, mitochondrial precursor.
HIT000031932 ATP5D 603150 Lung, small cell carcinoma ATP synthase subunit delta, mitochondrial precursor.
HIT000089741 ATP5D 603150 Lung, small cell carcinoma ATP synthase subunit delta, mitochondrial precursor.
HIT000272414 ATP5D 603150 Placenta Cot 25-normalized ATP synthase subunit delta, mitochondrial precursor.
HIT000281965 ATP5D 603150 Placenta Cot 25-normalized ATP synthase subunit delta, mitochondrial precursor.
HIT000283100 ATP5D 603150 HeLa cells Cot 25-normalized ATP synthase subunit delta, mitochondrial precursor.
HIT000294102 ATP5D 603150 Neuroblastoma Cot 10-normalized ATP synthase subunit delta, mitochondrial precursor.
HIT000305585 ATP5D 603150 B cells (Ramos cell line) Cot 25-normalized ATP synthase subunit delta, mitochondrial precursor.
HIT000322589 ATP5D 603150 ATP synthase subunit delta, mitochondrial precursor.
HIT000284228 ATP5D 603150 Neuroblastoma Cot 50-normalized Similar to ATP synthase subunit delta, mitochondrial precursor.
HIT000038255 ATP5D 603150 Brain, hypothalamus ATP synthase subunit delta, mitochondrial precursor.
HIT000367397 ATP5D 603150 ATP synthase subunit delta, mitochondrial precursor.

RefSeq
ID Definition
NM_001687 Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit (ATP5D), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.
NM_001001975 Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit (ATP5D), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000215375 ATP synthase subunit delta, mitochondrial Precursor (F-ATPase delta subunit) [Source:UniProtKB/Swiss- Prot;Acc:P30049]
ENST00000395633 ATP synthase subunit delta, mitochondrial Precursor (F-ATPase delta subunit) [Source:UniProtKB/Swiss- Prot;Acc:P30049]
 
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