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AS locus structure map

HIX0015243: Similar to Symplekin.
Chromosome: 19 Position: 46318668..46366548 (47.9Kbp) Strand: - Number of RASVs: 7
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0015243 07-0000633 (mouse_mrna)
HIX0015243 01-0000924 (rat_rna)
HIX0015243 19-0000766 (chimpanzee_rna)
HIX0015243 01-0000699 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000325626 SYMPK 602388 muscle adult Similar to Symplekin.
HIT000040982 SYMPK 602388 Lung, Spleen, fetal, pooled Similar to Symplekin (Fragment).
HIT000049873 SYMPK 602388 spleen Similar to Symplekin (Fragment).
HIT000057812 SYMPK 602388 human amygdala adult Similar to Symplekin (Fragment).
HIT000305125 SYMPK 602388 T cells (Jurkat cell line) Cot 10-normalized Similar to Symplekin.
HIT000328959 SYMPK 602388 brain Similar to Symplekin (Fragment).
HIT000329885 SYMPK 602388 brain Similar to Symplekin (Fragment).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000220084 SYMPK 602388 colon carcinoma Similar to Symplekin.
HIT000494876 SYMPK 602388 placenta Similar to Symplekin (Fragment).

RefSeq
ID Definition
NM_004819 Homo sapiens symplekin (SYMPK), mRNA.

Ensembl
ID Definition
ENST00000245934 Symplekin [Source:UniProtKB/Swiss- Prot;Acc:Q92797]
ENST00000340643 Symplekin [Source:UniProtKB/Swiss- Prot;Acc:Q92797]
 
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