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AS locus structure map

HIX0016104: Claudin-14.
Chromosome: 21 Position: 37832919..37948867 (115.9Kbp) Strand: - Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0016104 21-0000087 (chimpanzee_rna)
HIX0016104 03-0000299 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000252111 CLDN14 605608 Claudin-14.
HIT000077093 CLDN14 605608 liver Claudin-14.
HIT000248871 CLDN14 605608 placenta Claudin-14.
HIT000248872 CLDN14 605608 testis Claudin-14.
HIT000252110 CLDN14 605608 Claudin-14.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000035679 CLDN14 605608 Skin, melanoma, amelanotic Claudin-14.

RefSeq
ID Definition
NM_012130 Homo sapiens claudin 14 (CLDN14), transcript variant 2, mRNA.
NM_144492 Homo sapiens claudin 14 (CLDN14), transcript variant 1, mRNA.
NM_001146077 Homo sapiens claudin 14 (CLDN14), transcript variant 3, mRNA.
NM_001146078 Homo sapiens claudin 14 (CLDN14), transcript variant 4, mRNA.
NM_001146079 Homo sapiens claudin 14 (CLDN14), transcript variant 5, mRNA.

Ensembl
ID Definition
ENST00000342108 Claudin-14 [Source:UniProtKB/Swiss- Prot;Acc:O95500]
ENST00000399135 Claudin-14 [Source:UniProtKB/Swiss- Prot;Acc:O95500]
ENST00000399136 Claudin-14 [Source:UniProtKB/Swiss- Prot;Acc:O95500]
ENST00000399137 Claudin-14 [Source:UniProtKB/Swiss- Prot;Acc:O95500]
ENST00000399139 Claudin-14 [Source:UniProtKB/Swiss- Prot;Acc:O95500]
 
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