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AS locus structure map

HIX0016265: Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
Chromosome: 22 Position: 21319396..21353350 (34.0Kbp) Strand: + Number of RASVs: 9
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0016265 16-0000238 (mouse_mrna)
HIX0016265 16-0000364 (mouse_mrna)
HIX0016265 11-0000170 (rat_rna)
HIX0016265 11-0000341 (rat_rna)
HIX0016265 22-0000060 (chimpanzee_rna)
HIX0016265 10-0000809 (macaque_rna)
HIX0016265 26-0000346 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000011649 AIFM3 brain Apoptosis-inducing factor 3 (EC 1.-.-.-) (Apoptosis-inducing factor- like protein).
HIT000046953 brain Similar to Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
HIT000050906 LZTR1 600574 Duodenum, adenocarcinoma Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
HIT000490971 LZTR1 600574 thalamus Similar to Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
HIT000499655 AIFM3 corpus callosum Similar to Apoptosis-inducing factor, mitochondrion-associated, 3 isoform 2.
HIT000019699 AIFM3 caudate nucleus Rieske [2Fe-2S] iron-sulphur domain containing protein.
HIT000028610 LZTR1 600574 lymph node adult Similar to Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
HIT000041563 AIFM3 Pancreas, Spleen, adult pooled Apoptosis-inducing factor, mitochondrion-associated, 3 isoform 2.
HIT000296414 AIFM3 Fetal brain Similar to Apoptosis-inducing factor, mitochondrion-associated, 3 isoform 2.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000306006 AIFM3 Adult brain Apoptosis-inducing factor 3 (EC 1.-.-.-) (Apoptosis-inducing factor- like protein).
HIT000432368 LZTR1 600574 brain fetal Similar to Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
HIT000340875 LZTR1 600574 Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
HIT000101443 LZTR1 600574 brain fetus Similar to Leucine-zipper-like transcriptional regulator 1 (LZTR-1).
HIT000490205 AIFM3 hippocampus Similar to Apoptosis-inducing factor, mitochondrion-associated, 3 isoform 2.

RefSeq
ID Definition
NM_006767 Homo sapiens leucine-zipper-like transcription regulator 1 (LZTR1), mRNA.
NM_144704 Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 3 (AIFM3), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.
NM_001018060 Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 3 (AIFM3), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.
NM_001146288 Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 3 (AIFM3), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.
NR_027464 Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 3 (AIFM3), transcript variant 4, transcribed RNA.

Ensembl
ID Definition
ENST00000215739 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
ENST00000335375 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000389355 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
ENST00000399167 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000333607 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000399163 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000405089 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000414985 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
ENST00000415354 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
ENST00000415817 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
ENST00000417515 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000426113 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000434714 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000439171 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
ENST00000440238 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000441376 Apoptosis-inducing factor 3 (EC 1.-.-.-)(Apoptosis- inducing factor-like protein) [Source:UniProtKB/Swiss- Prot;Acc:Q96NN9]
ENST00000443265 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
ENST00000452988 Leucine-zipper-like transcriptional regulator 1 (LZTR-1) [Source:UniProtKB/Swiss-Prot;Acc:Q8N653]
 
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