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AS locus structure map

HIX0017025: Cullin 4B isoform 1.
Chromosome: X Position: 119658447..119709684 (51.2Kbp) Strand: - Number of RASVs: 5
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0017025 X-0000028 (mouse_mrna)
HIX0017025 X-0000297 (rat_rna)
HIX0017025 X-0000431 (chimpanzee_rna)
HIX0017025 17-0000111 (macaque_rna)
HIX0017025 X-0000018 (macaque_rna)
HIX0017025 X-0000500 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000054572 CUL4B 300639 liver fetal Cullin-4B (CUL-4B).
HIT000051648 CUL4B 300639 Testis Cullin 4B isoform 1.
HIT000054426 CUL4B 300639 human amygdala adult Similar to Cullin-4B (CUL-4B).
HIT000074071 CUL4B 300639 Similar to Cullin-4B (CUL-4B).
HIT000493705 CUL4B 300639 teratocarcinoma Similar to Cullin-4B (CUL-4B).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000043561 CUL4B 300639 chondrocytes (HC) Cullin-4B (CUL-4B).
HIT000055743 CUL4B 300639 human uterus endothel primary cell culture adult Cullin-4B (CUL-4B).
HIT000253221 CUL4B 300639 Cullin-4B (CUL-4B).
HIT000306995 CUL4B 300639 endometrium carcinoma cell line adult Similar to Cullin 4B isoform 1.
HIT000433903 CUL4B 300639 testis Cullin 4B isoform 1.

RefSeq
ID Definition
NM_003588 Homo sapiens cullin 4B (CUL4B), transcript variant 1, mRNA.
NM_001079872 Homo sapiens cullin 4B (CUL4B), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000336592 Cullin-4B (CUL-4B) [Source:UniProtKB/Swiss- Prot;Acc:Q13620]
ENST00000404115 Cullin-4B (CUL-4B) [Source:UniProtKB/Swiss- Prot;Acc:Q13620]
ENST00000371322 Cullin-4B (CUL-4B) [Source:UniProtKB/Swiss- Prot;Acc:Q13620]
ENST00000371323 Cullin-4B (CUL-4B) [Source:UniProtKB/Swiss- Prot;Acc:Q13620]
 
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