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AS locus structure map

HIX0017319: Similar to Phosphoglycerate mutase family member 5 precursor (Bcl-XL-binding protein v68).
Chromosome: 12 Position: 133264192..133308232 (44.0Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0017319 05-0000684 (mouse_mrna)
HIX0017319 12-0000087 (rat_rna)
HIX0017319 12-0000851 (chimpanzee_rna)
HIX0017319 12-0000852 (chimpanzee_rna)
HIX0017319 26-0000034 (dog_rna)
HIX0017319 26-0000035 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000265217 PXMP2 Eye, retinoblastoma Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein).
HIT000033668 PGAM5 Cervix, carcinoma Phosphoglycerate mutase family member 5.
HIT000484764 PGAM5 Phosphoglycerate mutase family member 5 precursor (Bcl-XL-binding protein v68).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000075007 PXMP2 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein).
HIT000083773 PXMP2 retina Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein).
HIT000034608 PXMP2 Muscle, rhabdomyosarcoma Similar to Peroxisomal membrane protein 2, 22kDa.

RefSeq
ID Definition
NM_018663 Homo sapiens peroxisomal membrane protein 2, 22kDa (PXMP2), mRNA.
NM_138575 Homo sapiens phosphoglycerate mutase family member 5 (PGAM5), mRNA.

Ensembl
ID Definition
ENST00000317479 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein) [Source:UniProtKB/Swiss- Prot;Acc:Q9NR77]
ENST00000428960 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein) [Source:UniProtKB/Swiss- Prot;Acc:Q9NR77]
ENST00000454808 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein) [Source:UniProtKB/Swiss- Prot;Acc:Q9NR77]
ENST00000317555 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein) [Source:UniProtKB/Swiss- Prot;Acc:Q9NR77]
 
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