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AS locus structure map

HIX0018170: Collagen alpha-1(XXIV) chain precursor.
Chromosome: 1 Position: 86194916..86622455 (427.5Kbp) Strand: - Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0018170 03-0000625 (mouse_mrna)
HIX0018170 02-0000829 (rat_rna)
HIX0018170 01-0000670 (chimpanzee_rna)
HIX0018170 01-0001357 (macaque_rna)
HIX0018170 06-0000720 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000019711 caudate nucleus Conserved hypothetical protein.
HIT000329621 COL24A1 610025 brain Similar to Collagen alpha-1(XXIV) chain precursor.
HIT000427819 COL24A1 610025 caudate nucleus Similar to Collagen alpha-1(XXIV) chain precursor.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
NM_152890 Homo sapiens collagen, type XXIV, alpha 1 (COL24A1), mRNA.

Ensembl
ID Definition
ENST00000370571 Collagen alpha-1(XXIV) chain Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q17RW2]
ENST00000426639 Collagen alpha-1(XXIV) chain Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q17RW2]
ENST00000436319 Collagen alpha-1(XXIV) chain Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q17RW2]
 
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