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AS locus structure map

HIX0019573: Similar to Dentin matrix protein 4 precursor (DMP-4) (Protein FAM20C).
Chromosome: 7 Position: 192969..300711 (107.7Kbp) Strand: + Number of RASVs: 3
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0019573 12-0000702 (rat_rna)
HIX0019573 07-0000037 (chimpanzee_rna)
HIX0019573 06-0000069 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000052316 FAM20C 611061 Brain, anaplastic oligodendroglioma with Dentin matrix protein 4 precursor (DMP-4) (Protein FAM20C).
HIT000026379 FAM20C 611061 brain fetal Similar to Dentin matrix protein 4 precursor (DMP-4) (Protein FAM20C).
HIT000026389 FAM20C 611061 brain fetal Similar to Dentin matrix protein 4 precursor (DMP-4) (Protein FAM20C).

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000243735 FAM20C 611061 brain Dentin matrix protein 4 precursor (DMP-4) (Protein FAM20C).

RefSeq
ID Definition
NM_020223 Homo sapiens family with sequence similarity 20, member C (FAM20C), mRNA.

Ensembl
ID Definition
ENST00000313766 Dentin matrix protein 4 Precursor (DMP-4)(Protein FAM20C) [Source:UniProtKB/Swiss-Prot;Acc:Q8IXL6]
 
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