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AS locus structure map

HIX0021064: Similar to p130Cas-associated protein (p140Cap) (SNAP-25-interacting protein) (SNIP).
Chromosome: 17 Position: 36686259..36762183 (75.9Kbp) Strand: - Number of RASVs: 4
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0021064 11-0000209 (mouse_mrna)
HIX0021064 10-0000122 (rat_rna)
HIX0021064 17-0000401 (chimpanzee_rna)
HIX0021064 16-0000220 (macaque_rna)
HIX0021064 09-0000459 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000041848 SRCIN1 610786 Eye, normal, pigmented retinal epithelium Similar to p130Cas-associated protein (p140Cap) (SNAP-25-interacting protein) (SNIP).
HIT000046538 SRCIN1 610786 cerebellum Similar to p130Cas-associated protein (p140Cap) (SNAP-25-interacting protein) (SNIP).
HIT000242432 SRCIN1 610786 brain SNAP25-interacting protein.
HIT000489651 SRCIN1 610786 brain Similar to SNAP25-interacting protein.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition

RefSeq
ID Definition
NM_025248 Homo sapiens SNAP25-interacting protein (SNIP), mRNA.

Ensembl
ID Definition
ENST00000264659 p130Cas-associated protein (p140Cap)(SNAP-25- interacting protein)(SNIP) [Source:UniProtKB/Swiss- Prot;Acc:Q9C0H9]
ENST00000398579 p130Cas-associated protein (p140Cap)(SNAP-25- interacting protein)(SNIP) [Source:UniProtKB/Swiss- Prot;Acc:Q9C0H9]
 
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