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AS locus structure map

HIX0022611: WD repeat-containing protein 25.
Chromosome: 14 Position: 100842755..100996640 (153.9Kbp) Strand: + Number of RASVs: 6
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0022611 12-0000710 (mouse_mrna)
HIX0022611 05-0001376 (rat_rna)
HIX0022611 06-0000609 (rat_rna)
HIX0022611 14-0000453 (chimpanzee_rna) low priority
HIX0022611 14-0000454 (chimpanzee_rna)
HIX0022611 07-0000141 (macaque_rna) low priority
HIX0022611 07-0000472 (macaque_rna)
HIX0022611 08-0000456 (dog_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000033554 WDR25 Skin, melanotic melanoma, high MDR. Similar to WD repeat-containing protein 25.
HIT000301037 WDR25 T cells (Jurkat cell line) Cot 10-normalized WD repeat-containing protein 25.
HIT000031665 WDR25 Muscle, rhabdomyosarcoma Similar to WD repeat-containing protein 25.
HIT000251478 WDR25 WD repeat-containing protein 25.
HIT000262839 WDR25 Placenta, pre-eclamptic Similar to WD repeat-containing protein 25.
HIT000424757 WDR25 neuroblastoma WD repeat-containing protein 25.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000267077 WDR25 Neuroblastoma Similar to WD repeat-containing protein 25.

RefSeq
ID Definition
NM_024515 Homo sapiens WD repeat domain 25 (WDR25), transcript variant 1, mRNA.
NM_001161476 Homo sapiens WD repeat domain 25 (WDR25), transcript variant 2, mRNA.

Ensembl
ID Definition
ENST00000335290 WD repeat-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q64LD2]
ENST00000402312 WD repeat-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q64LD2]
 
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