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AS locus structure map

HIX0023439: Conserved hypothetical protein.
Chromosome: 9 Position: 140145713..140147935 (2.2Kbp) Strand: + Number of RASVs: 7
ORF: Full-length Truncated NMD UTR
Splice-site: GT-AG GC-AG AT-AC Other NAGNAG
AS: AS exon AS junction Polymorphism: SNP

Locus and transcript information


AS locus
Hyperlink management Corresponding other species locus
HIX0023439 02-0000959 (mouse_mrna)
HIX0023439 09-0000642 (chimpanzee_rna)
HIX0023439 15-0000759 (macaque_rna)

RASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000390779 C9orf173 Pooled, cerebellum, kidney, placenta, Conserved hypothetical protein.
HIT000022419 C9orf173 testis Conserved hypothetical protein.
HIT000093273 C9orf173 Testis Conserved hypothetical protein.
HIT000099120 C9orf173 Testis Conserved hypothetical protein.
HIT000502731 C9orf173 Pooled, cerebellum, kidney, placenta, Conserved hypothetical protein.
HIT000502733 C9orf173 Pooled, cerebellum, kidney, placenta, Conserved hypothetical protein.
HIT000502734 C9orf173 Pooled, cerebellum, kidney, placenta, Conserved hypothetical protein.

Other ASV
Hyperlink management HUGO OMIM Cell type Tissue type Development stage Sex Definition
HIT000502737 C9orf173 Pooled, cerebellum, kidney, placenta, Conserved hypothetical protein.

RefSeq
ID Definition
NM_001004353 Homo sapiens hypothetical protein LOC441476 (LOC441476), mRNA.

Ensembl
ID Definition
ENST00000388931 Uncharacterized protein FLJ40246 [Source:UniProtKB/Swiss-Prot;Acc:Q8N7X2]
ENST00000412566 Uncharacterized protein FLJ40246 [Source:UniProtKB/Swiss-Prot;Acc:Q8N7X2]
ENST00000416962 Uncharacterized protein FLJ40246 [Source:UniProtKB/Swiss-Prot;Acc:Q8N7X2]
 
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